Diffusion MRI: Difference between revisions
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! {{Hl2}} | Collaborators | ! {{Hl2}} | Collaborators | ||
! {{Hl2}} | Dataset Date Received / Path | ! {{Hl2}} | Dataset Date Received / Path | ||
! {{Hl2}} | Status | |||
! {{Hl2}} | Scanner | ! {{Hl2}} | Scanner | ||
! {{Hl2}} | Format | ! {{Hl2}} | Format | ||
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! {{Hl2}} | Voxel Size (mm) | ! {{Hl2}} | Voxel Size (mm) | ||
! {{Hl2}} | Orientation | ! {{Hl2}} | Orientation | ||
|- | |- | ||
| {{Hl2}} | Cognitive Aging | | {{Hl2}} | Cognitive Aging | ||
| Line 23: | Line 23: | ||
| header = 2008-07-20 | | header = 2008-07-20 | ||
| content = <code>$G/data/diffusion/st_louis/cognitive_aging.2008.07.20</code> | | content = <code>$G/data/diffusion/st_louis/cognitive_aging.2008.07.20</code> | ||
}} | |||
| {{hidden | ta1 = left | headercss = font-size: 100%; width: 24ex; | contentcss = font-size: 90%; width: 24ex; | |||
| header = Not processed | |||
| content = Single dataset needs to be processed ASAP for social reasons | |||
}} | }} | ||
| ?? | | ?? | ||
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| 2.0x2.0x2.0 | | 2.0x2.0x2.0 | ||
| ?? | | ?? | ||
|- | |- | ||
| {{Hl2}} rowspan="2" | Fibers at Risk | | {{Hl2}} rowspan="2" | Fibers at Risk | ||
| Line 39: | Line 39: | ||
| Jack Simon | | Jack Simon | ||
| ?? | | ?? | ||
| {{hidden | ta1 = left | headercss = font-size: 100%; width: 24ex; | contentcss = font-size: 90%; width: 24ex; | |||
| header = Not downloaded | |||
| content = Longitudinal data and old proof-of-concept data need to be loaded into <code>$G/data/diffusion</code> | |||
}} | |||
| 1.5T ?? | | 1.5T ?? | ||
| ?? | | ?? | ||
| Line 45: | Line 49: | ||
| ?? | | ?? | ||
| ?? | | ?? | ||
|- | |- | ||
| Portland, OR | | Portland, OR | ||
| Jack Simon (Portland [[wikipedia:VA Hospital|VA]]), Bill Rooney (phys. chemist at [[wikipedia:OHSU|OHSU]] AIRC) | | Jack Simon (Portland [[wikipedia:VA Hospital|VA]]), Bill Rooney (phys. chemist at [[wikipedia:OHSU|OHSU]] AIRC) | ||
| ?? | | ?? | ||
| {{hidden | ta1 = left | headercss = font-size: 100%; width: 24ex; | contentcss = font-size: 90%; width: 24ex; | |||
| header = Not collected | |||
| content = Still waiting for the 7T protocol to finalize | |||
}} | |||
| 7T GE | | 7T GE | ||
| ?? | | ?? | ||
| Line 59: | Line 63: | ||
| ?? | | ?? | ||
| ?? | | ?? | ||
|} | |} | ||
Revision as of 17:56, 19 August 2008
Collaborative Research Projects
| Project | Location | Collaborators | Dataset Date Received / Path | Status | Scanner | Format | # Scans | Resolution (voxels) | Voxel Size (mm) | Orientation |
|---|---|---|---|---|---|---|---|---|---|---|
| Cognitive Aging | St. Louis | Rob Paul (UMSL), Tom Conturo (WUSTL) | 2008-07-20
|
Not processed
|
?? | Interfile | 1 | 83x110x64 x 36 DWIs | 2.0x2.0x2.0 | ?? |
| Fibers at Risk | Colorado | Jack Simon | ?? | Not downloaded
|
1.5T ?? | ?? | ?? | ?? | ?? | ?? |
| Portland, OR | Jack Simon (Portland VA), Bill Rooney (phys. chemist at OHSU AIRC) | ?? | Not collected
|
7T GE | ?? | ?? | ?? | ?? | ?? |
Software
File Formats
| Format | Extension |
|---|---|
| DICOM | .ima; .dcm |
| DICOM Mosaic | .ima; .dcm |
| Analyze | .hdr / .img |
| NIfTI | .nii; .nii.gz; .hdr / .img |
| Interfile | .ifh / .img |
| MRIimage | none |