Cartilage building: Difference between revisions

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#cp collected_results directory into sucject directory
#cp collected_results directory into sucject directory
#cp <bone_tag>_coord.dat files from bioeng  
#cp <bone_tag>_coord.dat files from bioeng  
#run matlab -nojvm -nosplash -r "addpath('/map/gfx0/users/USER/project/wrist/pipeline'); genGlobalRt('/map/gfx0/users/ehalilaj/backup_project/wrist/cart_data/E06001/collected_results/','outRT_*L.txt','/map/gfx0/users/ehalilaj/backup_project/wrist/cart_data/E06001/','%s15L_anim.RT','log-genGlobalRt.txt',1); exit;"
#run matlab -nojvm -nosplash -r "addpath('/map/gfx0/users/USER/project/wrist/pipeline'); genGlobalRt('/map/gfx0/"datapath"/collected_results/','outRT_*L.txt','/map/gfx0/"datapath"/','%s15L_anim.RT','log-genGlobalRt.txt',1); exit;"
#edit joints_linux and joints_one_linux as in “trail_contact_areas.txt”
#edit joints_linux and joints_one_linux as in “trail_contact_areas.txt”
#run cleanup_sepPoses.m &  cleanup.m  
#run cleanup_sepPoses.m &  cleanup.m  
#run run_cart_script & run_cart_script_app
#run run_cart_script & run_cart_script_app

Latest revision as of 15:50, 29 September 2009

Follow these steps to build cartilage:

  1. cp .iv files into subject directory
  2. cp collected_results directory into sucject directory
  3. cp <bone_tag>_coord.dat files from bioeng
  4. run matlab -nojvm -nosplash -r "addpath('/map/gfx0/users/USER/project/wrist/pipeline'); genGlobalRt('/map/gfx0/"datapath"/collected_results/','outRT_*L.txt','/map/gfx0/"datapath"/','%s15L_anim.RT','log-genGlobalRt.txt',1); exit;"
  5. edit joints_linux and joints_one_linux as in “trail_contact_areas.txt”
  6. run cleanup_sepPoses.m & cleanup.m
  7. run run_cart_script & run_cart_script_app