Brain Circuit Diagrams - Revision history

Hua Guo: /* Heatmap showing recommended brain regions */

2012-09-20T00:29:10Z

Heatmap showing recommended brain regions

← Older revision		Revision as of 00:29, 20 September 2012
Line 111:		Line 111:

	===== Heatmap showing recommended brain regions =====		===== Heatmap showing recommended brain regions =====
	This is one example where we could incorporate machine learning and community effort to assist brain scientist in their research. When a user has obtained information displayed by the system about one or several brain regions of interest (e.g., he might get a set of regions that are known to connect to one particular region of interest, or a set of regions that are known to act as intermediate regions that connect two brain regions that the user is interested in ), it is likely that he will need to narrow the result. The ~~filtering~~ process ~~could~~ be ~~assisted by~~		This is one example where we could incorporate machine learning and community effort to assist brain scientist in their research. When a user has obtained information displayed by the system about one or several brain regions of interest (e.g., he might get a set of regions that are known to connect to one particular region of interest, or a set of regions that are known to act as intermediate regions that connect two brain regions that the user is interested in ), it is likely that he will need to narrow the result. The tool could assist this process by integrating community knowledge, e,g, present to the user visually which brain areas are more likely to be relevant given the user's interest based on analysis histories of other users.
	(Originated from discussion with Steve Gomez).		(Originated from discussion with Steve Gomez).

Hua Guo: /* Integrate experiment data, hypothesis and known connections */

2012-09-20T00:26:05Z

Integrate experiment data, hypothesis and known connections

← Older revision		Revision as of 00:26, 20 September 2012
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	==== Future potentials ====		==== Future potentials ====
	===== Integrate experiment data, hypothesis and known connections =====		===== Integrate experiment data, hypothesis and known connections =====
			One potential use case is that when a user has used the tool to form a hypothesis and obtained some experiment data about the brain connections that he has hypothesized, he will want to check which existing literature supports / disagrees with his finding and / or good ways to explain the obtained connections. One potential improvement for the tool would be to allow the user to upload their data and let the tool provide information related to above-mentioned questions based on information stored in the database.

	===== Visualizing uncertainties =====		===== Visualizing uncertainties =====
	Many data from science domain involve uncertainty, and brain connectivity data are no exception. Information about a connection reported twenty years ago might be overridden by newly developed, more accurate techniques. Also, it might be important for some brain scientists to be able to distinguish between connections that are shown to be non-existent and possible connections that are just not tested yet.		Many data from science domain involve uncertainty, and brain connectivity data are no exception. Information about a connection reported twenty years ago might be overridden by newly developed, more accurate techniques. Also, it might be important for some brain scientists to be able to distinguish between connections that are shown to be non-existent and possible connections that are just not tested yet.

Hua Guo: /* Future potentials */

2012-09-19T14:28:51Z

Future potentials

← Older revision		Revision as of 14:28, 19 September 2012
Line 114:		Line 114:
	===== Show connectivity among multiple brain regions =====		===== Show connectivity among multiple brain regions =====
	While some brain scientists study connectivity among major brain regions, some others study the brain as a small world network that might consist hundreds of smaller brain regions (or neurons). In this case, a user might be interested in the connectivity among a group of nodes instead of two nodes. A possible improvement would then be able to display a sub-graph given an arbitrary number of brain regions.(Originated from discussion with David Badre)		While some brain scientists study connectivity among major brain regions, some others study the brain as a small world network that might consist hundreds of smaller brain regions (or neurons). In this case, a user might be interested in the connectivity among a group of nodes instead of two nodes. A possible improvement would then be able to display a sub-graph given an arbitrary number of brain regions.(Originated from discussion with David Badre)

			===== Focus + context =====

	== Cognitive experiments ==		== Cognitive experiments ==

Hua Guo: /* Show connectivity among multiple brain regions */

2012-09-19T14:25:20Z

Show connectivity among multiple brain regions

← Older revision		Revision as of 14:25, 19 September 2012
Line 113:		Line 113:

	===== Show connectivity among multiple brain regions =====		===== Show connectivity among multiple brain regions =====
	(Originated from discussion with David Badre)		While some brain scientists study connectivity among major brain regions, some others study the brain as a small world network that might consist hundreds of smaller brain regions (or neurons). In this case, a user might be interested in the connectivity among a group of nodes instead of two nodes. A possible improvement would then be able to display a sub-graph given an arbitrary number of brain regions.(Originated from discussion with David Badre)

	== Cognitive experiments ==		== Cognitive experiments ==

Hua Guo: /* Show connectivity among multiple brain regions */

2012-09-18T21:05:35Z

Show connectivity among multiple brain regions

← Older revision		Revision as of 21:05, 18 September 2012
Line 113:		Line 113:

	===== Show connectivity among multiple brain regions =====		===== Show connectivity among multiple brain regions =====
			(Originated from discussion with David Badre)

	== Cognitive experiments ==		== Cognitive experiments ==

Hua Guo: /* Heatmap showing recommended brain regions */

2012-09-18T21:03:18Z

Heatmap showing recommended brain regions

← Older revision		Revision as of 21:03, 18 September 2012
Line 109:		Line 109:

	===== Heatmap showing recommended brain regions =====		===== Heatmap showing recommended brain regions =====
	~~(Originated from discussion with Steve Gomez)~~		This is one example where we could incorporate machine learning and community effort to assist brain scientist in their research. When a user has obtained information displayed by the system about one or several brain regions of interest (e.g., he might get a set of regions that are known to connect to one particular region of interest, or a set of regions that are known to act as intermediate regions that connect two brain regions that the user is interested in ), it is likely that he will need to narrow the result. The filtering process could be assisted by
	This is one example where we could incorporate machine learning and community effort to assist brain scientist		(Originated from discussion with Steve Gomez).

	===== Show connectivity among multiple brain regions =====		===== Show connectivity among multiple brain regions =====

Hua Guo: /* Visualizing uncertainties */

2012-09-18T20:51:38Z

Visualizing uncertainties

← Older revision		Revision as of 20:51, 18 September 2012
Line 105:		Line 105:
	===== Integrate experiment data, hypothesis and known connections =====		===== Integrate experiment data, hypothesis and known connections =====
	===== Visualizing uncertainties =====		===== Visualizing uncertainties =====
			Many data from science domain involve uncertainty, and brain connectivity data are no exception. Information about a connection reported twenty years ago might be overridden by newly developed, more accurate techniques. Also, it might be important for some brain scientists to be able to distinguish between connections that are shown to be non-existent and possible connections that are just not tested yet.
	(Originated from discussion with Steven Sloman)		(Originated from discussion with Steven Sloman)
	Many data from science domain involve uncertainty, and brain connectivity data are no exception. Information about a connection reported twenty years ago might be overridden by newly developed, more accurate techniques. Also, it might be important for some brain scientists to be able to distinguish between connections that are shown to be non-existent and possible connections that are just not tested yet.

	===== Heatmap showing recommended brain regions =====		===== Heatmap showing recommended brain regions =====

Hua Guo: /* Visualizing uncertainties */

2012-09-18T20:51:19Z

Visualizing uncertainties

← Older revision		Revision as of 20:51, 18 September 2012
Line 105:		Line 105:
	===== Integrate experiment data, hypothesis and known connections =====		===== Integrate experiment data, hypothesis and known connections =====
	===== Visualizing uncertainties =====		===== Visualizing uncertainties =====
			(Originated from discussion with Steven Sloman)
	Many data from science domain involve uncertainty, and brain connectivity data are no exception. Information about a connection reported twenty years ago might be overridden by newly developed, more accurate techniques. Also, it might be important for some brain scientists to be able to distinguish between connections that are shown to be non-existent and possible connections that are just not tested yet.		Many data from science domain involve uncertainty, and brain connectivity data are no exception. Information about a connection reported twenty years ago might be overridden by newly developed, more accurate techniques. Also, it might be important for some brain scientists to be able to distinguish between connections that are shown to be non-existent and possible connections that are just not tested yet.

Hua Guo: /* Heatmap showing recommended brain regions */

2012-09-18T20:51:06Z

Heatmap showing recommended brain regions

← Older revision		Revision as of 20:51, 18 September 2012
Line 108:		Line 108:

	===== Heatmap showing recommended brain regions =====		===== Heatmap showing recommended brain regions =====
			(Originated from discussion with Steve Gomez)
			This is one example where we could incorporate machine learning and community effort to assist brain scientist

	===== Show connectivity among multiple brain regions =====		===== Show connectivity among multiple brain regions =====

Hua Guo: /* Visualizing uncertainties */

2012-09-18T20:49:45Z

Visualizing uncertainties

← Older revision		Revision as of 20:49, 18 September 2012
Line 105:		Line 105:
	===== Integrate experiment data, hypothesis and known connections =====		===== Integrate experiment data, hypothesis and known connections =====
	===== Visualizing uncertainties =====		===== Visualizing uncertainties =====
	Many data from science domain involve uncertainty, and brain connectivity data are no exception.		Many data from science domain involve uncertainty, and brain connectivity data are no exception. Information about a connection reported twenty years ago might be overridden by newly developed, more accurate techniques. Also, it might be important for some brain scientists to be able to distinguish between connections that are shown to be non-existent and possible connections that are just not tested yet.

	===== Heatmap showing recommended brain regions =====		===== Heatmap showing recommended brain regions =====