http://vrl.cs.brown.edu/wiki/api.php?action=feedcontributions&feedformat=atom&user=Wesley+Miller 2026-04-19T19:44:43Z User contributions MediaWiki 1.43.1 http://vrl.cs.brown.edu/wiki/index.php?title=User:Wesley_Miller&diff=6829 2016-05-28T19:16:37Z

<p>Wesley Miller: </p> <hr /> <div>I worked as a visiting RPI undergraduate on $G maintenance and CAVE applications from the summer of 2012 to the summer of 2014. I worked on my Master's degree at Brown from then until May 2016.<br /> <br /> My summer 2012 project was to get [[CavePainting]] building again on CS and CCV systems, which required work with [[MMotion]], [[Kuchora]], [[VRG3D]], and [[VRPN]]. The resulting instructions can be found at [[Building CavePainting]]; however, as of May 2016, they are out-of-date. <br /> <br /> From then until becoming a Master's student, I worked mostly on $G maintenance and nightly build tests. Information about these systems can be found at [[Automatic Build System]] and [[Software tests]]. I did not implement the test systems, but I fixed many projects which were failing nightly build and/or run tests, including [[CavePainting]]. I also worked on other applications for the CAVE and YURT in this time, including [[Building ParaView]], [[Integrating Scalable with ParaView]], and [[ADVISER]].<br /> <br /> My work on making the Vrui toolkit (http://keckcaves.org/software/vrui) compatible with the CAVE and YURT as well as our research applications, MeshViewer and 3DVisualizer, can be found at https://github.com/jonovotny/VruiScalable. As of May 2016, it is managed by [[User:Johannes Novotny|Johannes Novotny]].<br /> <br /> I also, along with [[User:Johannes Novotny|Johannes Novotny]] and [[User:Josh Tveite|Josh Tveite]] as well as [[User:David Laidlaw|David]] and collaborators from Virginia Tech, worked on running a user study, which required the use of Vrui and MeshViewer, and writing &quot;Effects of Display Fidelity and Platform on Analysis Performance with Biological Datasets in Virtual Reality&quot; to submit to Vis 2016.<br /> <br /> Data from my Master's project, ''Virtually Visualizing Vessels: A Study of the Annotation of Placental Vasculature from MRI in Large-scale Virtual Reality for Surgical Planning'', is in a private repository also under the management of [[User:Johannes Novotny|Johannes Novotny]]. The project required the use of Vrui and 3DVisualizer. As of May 2016, the thesis has been submitted to the department, and it will be listed on http://cs.brown.edu/research/pubs/theses/masters/; we are also preparing to submit it to TVCG.</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=User:Wesley_Miller&diff=6828 2016-05-26T21:25:55Z

<p>Wesley Miller: </p> <hr /> <div>I worked as a visiting RPI undergraduate on $G maintenance and CAVE applications from the summer of 2012 to the summer of 2014. I worked on my Master's degree at Brown from then until May 2016.<br /> <br /> My summer 2012 project was to get CavePainting building again on CS and CCV systems. The resulting instructions can be found at [[Building CavePainting]]; however, as of May 2016, they are out-of-date.<br /> <br /> From then until becoming a Master's student, I worked mostly on $G maintenance and nightly build tests.<br /> <br /> My work on making the Vrui toolkit compatible with the CAVE and YURT as well as our research applications can be found at https://github.com/jonovotny/VruiScalable. As of May 2016, it is managed by [[User:Johannes Novotny|Johannes Novotny]].<br /> <br /> Data from my Master's project, ''Virtually Visualizing Vessels: A Study of the Annotation of Placental Vasculature from MRI in Large-scale Virtual Reality for Surgical Planning'', is in a private repository also under the management of [[User:Johannes Novotny|Johannes Novotny]]. As of May 2016, the thesis has been submitted to the department, and it will be listed on http://cs.brown.edu/research/pubs/theses/masters/; we are also preparing to submit it to TVCG.</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=User:Wesley_Miller&diff=6827 2016-05-25T18:57:34Z

<p>Wesley Miller: add link</p> <hr /> <div>I worked as a visiting RPI undergraduate on $G maintenance and CAVE applications from the summer of 2012 to the summer of 2014. I worked on my Master's degree at Brown from then until May 2016.<br /> <br /> My work on making the Vrui toolkit compatible with the CAVE and YURT as well as our research applications can be found at https://github.com/jonovotny/VruiScalable. As of this writing, it is managed by [[User:Johannes Novotny|Johannes Novotny]].<br /> <br /> Data from my Master's project, ''Virtually Visualizing Vessels: A Study of the Annotation of Placental Vasculature from MRI in Large-scale Virtual Reality for Surgical Planning'', is in a private repository also under the management of [[User:Johannes Novotny|Johannes Novotny]]. As of this writing, the thesis has been submitted to the department, and it will be listed on http://cs.brown.edu/research/pubs/theses/masters/; we are also preparing to submit it to TVCG.</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=User:Wesley_Miller&diff=6826 2016-05-25T18:56:03Z

<p>Wesley Miller: legacy information</p> <hr /> <div>I worked as a visiting RPI undergraduate on $G maintenance and CAVE applications from the summer of 2012 to the summer of 2014. I worked on my Master's degree at Brown from then until May 2016.<br /> <br /> My work on making the Vrui toolkit compatible with the CAVE and YURT as well as our research applications can be found at https://github.com/jonovotny/VruiScalable. As of this writing, it is managed by [[User:Johannes Novotny|Johannes Novotny]].<br /> <br /> Data from my Master's project, ''Virtually Visualizing Vessels: A Study of the Annotation of Placental Vasculature from MRI in Large-scale Virtual Reality for Surgical Planning'', is in a private repository also under the management of [[User:Johannes Novotny|Johannes Novotny]]. As of this writing, the thesis has been submitted to the department, but there is no available link, and we are also preparing to submit it to TVCG.</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Plans_and_Goals&diff=6678 2015-06-16T19:14:05Z

<p>Wesley Miller: /* Wesley */ add summer goals</p> <hr /> <div>On this page the members of the [[VRL]] record and refine their goals for the current semester. This is a living document in which [[dhl]] will provide feedback. See the bottom of the page for links to past plans &amp; goals documents.<br /> <br /> == Current Schedule ==<br /> Meetings are on Mondays. The authoritative list is in dhl's calendar.<br /> <br /> == Current Plans and Goals (Summer '15) ==<br /> <br /> === [[User:Connor Gramazio|Connor]] ===<br /> '''&lt;span style=&quot;color:steelblue&quot;&gt;Boldfaced&lt;/span&gt;''' goals are those that mark the high-level success of each project.<br /> <br /> ===== '''Dissertation''' =====<br /> * By June 5: '''&lt;span style=&quot;color:steelblue&quot;&gt;send out complete first draft to dissertation committee&lt;/span&gt;'''<br /> * By September 4: '''&lt;span style=&quot;color:steelblue&quot;&gt;schedule proposal date&lt;/span&gt;'''<br /> <br /> ===== '''Genomics''' =====<br /> * Weekly: check up on MAGI interaction logs and process them through BLADE to verify collection is going smoothly<br /> * By June 26: respond to VIS review feedback<br /> * By June 30: complete MAGI view redesign and accompanying logging refactor<br /> * By June 30: create local MAGI annotation development sandbox for ETA development<br /> * By August 7: '''&lt;span style=&quot;color:steelblue&quot;&gt;create stand-alone ETA prototype that displays querryable network with annotation overlay&lt;/span&gt;'''<br /> * By September 4: draft a high-level ETA contribution document to ID ultimate project direction (e.g., drop topic modeling)<br /> <br /> ===== '''Color''' =====<br /> * By June 26: respond to VIS review feedback<br /> * By June 30: prototype D3 decomposition-by-category feature of Colorgorical<br /> * By July 10: prototype new Colorgorical scoring functions using Bayesian optimization procedure<br /> * By August 7: '''&lt;span style=&quot;color:steelblue&quot;&gt;complete integration of new scoring functions into Colorgorical&lt;/span&gt;'''<br /> * By September 4: '''&lt;span style=&quot;color:steelblue&quot;&gt;integrate visualization decomposition prototype as a palette preview feature&lt;/span&gt;'''<br /> <br /> ===== '''Other''' =====<br /> * '''&lt;span style=&quot;color:steelblue&quot;&gt;Cut back on non-dissertation projects to 0% commitment by end of summer&lt;/span&gt;'''<br /> <br /> === [[User:Hua Guo|Hua]] ===<br /> <br /> === [[User:Steven Gomez|Steve]] ===<br /> <br /> === [[User:Ryan Cabeen|Ryan]] ===<br /> <br /> * RP Imaging Studies<br /> ** Send update for request for additional bundles in SMART data<br /> ** Iron out details for South Africa analysis (group meeting on 6/10)<br /> *** ''Update'': fiber bundle length (need a couple more bundles)<br /> *** ''Update'': graph-based analysis w/ Laurie<br /> ** Keep up with paper reviewing and other requests<br /> * Diffusion outside brain<br /> ** ''Update'': support image analysis w/ Trey Crisco &amp; Ed Walsh<br /> * Yurt<br /> ** Demo as needed<br /> ** Provide support for CS137-related things<br /> ** Help Johannes with getting up to speed for TAing<br /> * Thesis work<br /> ** Complete a rough draft of dissertation<br /> ** Work with Dan to get bipolar imaging paper out<br /> ** ''Update'': Put together documentation of various analyses and tools<br /> <br /> === [[User:David Laidlaw|David]] ===<br /> <br /> === [[User:Wesley Miller|Wesley]] ===<br /> <br /> * CAVE/YURT<br /> ** Complete or nearly complete user study with Johannes<br /> ** Help out with Demos when needed<br /> ** Add new applications for use in YURT<br /> <br /> * Fitts' Law<br /> ** Work on paper with HCI seminar group<br /> <br /> * Third Person Perspective<br /> ** Make plans for future of 3PP project or something derivative<br /> <br /> * Hospital<br /> ** Discuss potential projects with Derek<br /> <br /> === [[User:Johannes Novotny|Johannes]] ===<br /> <br /> * Cave/Yurt<br /> ** Complete user study with Wesley<br /> ** Work on VR volume visualization (3D Visualizer/CaveVOX/...)<br /> ** Get more concrete collaboration with students of Robbert Creton or Kristi Wharton<br /> ** Help out with Demos when needed<br /> <br /> * CS137<br /> ** Set up clean development branch for CavePainting<br /> ** Get acquainted with the sourcecode<br /> ** Fix some bugs if possible<br /> <br /> * Fitts' Law<br /> ** Work on paper with HCI seminar group<br /> <br /> === [[User:Tom Sgouros|Tom]] ===<br /> <br /> &lt;!-- please don't edit below this line --&gt;<br /> <br /> ----<br /> <br /> == Past Plans and Goals ==<br /> * [[/Spring 2015|Spring '15]]<br /> * [[/Fall 2014|Fall '14]]<br /> * [[/Spring-Summer 2014|Spring-Summer '14]]<br /> * [[/Summer-Fall 2013|Summer-Fall '13]]<br /> * [[/Spring 2013|Spring '13]]<br /> * [[/Fall 2012|Fall '12]]<br /> * [[/Summer 2012|Summer '12]]<br /> * [[/Spring 2012|Spring '12]]<br /> * [[/Summer-Fall 2011|Summer-Fall '11]]<br /> * [[/Spring 2011|Spring '11]]<br /> * [[/Summer-Fall 2010|Summer-Fall '10]]<br /> * [[/Spring 2010|Spring '10]]<br /> * [[/Fall 2009|Fall '09]]<br /> * [[/Summer 2009|Summer '09]]<br /> * [[/Spring 2009|Spring '09]]<br /> * [[/Fall 2008|Fall '08]]<br /> * [http://sites.google.com/a/vis.cs.brown.edu/collaboravis/Home/summer-08-group-goals Summer '08]<br /> <br /> [[Category:VRL]]</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Plans_and_Goals&diff=6619 2015-01-22T05:04:32Z

<p>Wesley Miller: /* Wesley */</p> <hr /> <div>On this page the members of the [[VRL]] record and refine their goals for the current semester. This is a living document in which [[dhl]] will provide feedback. See the bottom of the page for links to past plans &amp; goals documents.<br /> <br /> == Current Schedule ==<br /> Meetings are on Mondays. The authoritative list is in dhl's calendar.<br /> <br /> == Current Plans and Goals (Spring '15) ==<br /> <br /> === [[User:Connor Gramazio|Connor]] ===<br /> '''&lt;span style=&quot;color:steelblue&quot;&gt;Boldfaced&lt;/span&gt;''' goals are those that mark the high-level success of each project.<br /> <br /> ===== '''Genomics VIS Project''' =====<br /> * By 1/12 (over break):<br /> ** change abstract to be more of a paper abstract and less of a book abstract<br /> ** make paper skeleton with clear evaluation plans, methods, and expected results<br /> ** determine if making the GD3 Notebook as a third tool is manageable given pre-VIS workload<br /> * By 1/19: '''&lt;span style=&quot;color:steelblue&quot;&gt;Complete and freeze GD3 v1 visualization library development&lt;/span&gt;'''<br /> ** Don't do more than bringing refactored library up to existing capabilities.<br /> * By 1/19: E-mail and recruit &gt;=5 experts for each tool that is being evaluated<br /> * By 2/2: Have all experts scheduled and have the evaluations set in stone and methods/procedure written into paper draft<br /> * By 2/20: '''&lt;span style=&quot;color:steelblue&quot;&gt;Have all evaluation completed and coded&lt;/span&gt;'''<br /> * By 3/9: E-mail David a complete, rough paper draft for VIS submission<br /> * By 3/16: Send out revised draft to all authors<br /> * By 3/21: Submit abstract to VIS and have a paper draft that is submittable<br /> * By 3/31: '''&lt;span style=&quot;color:steelblue&quot;&gt;Submit genomics viz paper to VIS&lt;/span&gt;'''<br /> <br /> ===== '''Color palette picker''' =====<br /> * By 1/12 (over break):<br /> ** Brainstorm a list of possible evaluations with total &gt;= 5 possible evaluations<br /> ** Send an abstract to Karen and David and a one-paragraph description of the evaluation plan<br /> ** Write paper skeleton<br /> * By 1/19: '''&lt;span style=&quot;color:steelblue&quot;&gt;Finish tool&lt;/span&gt;'''<br /> * By 1/26: Have a meeting/demo with David and Karen to get feedback on evaluation<br /> * By 1/26: Run pilot MTurk evaluations on discerinability and preference<br /> * By 2/9: '''&lt;span style=&quot;color:steelblue&quot;&gt;Have complete data from MTurk discernability and preference evaluations&lt;/span&gt;'''<br /> * By 3/2: E-Mail David and Karen a complete, rough paper draft for VIS submission<br /> * By 3/16: Have a submittable draft ready<br /> * By 3/21: Submit abstract to VIS<br /> * By 3/31: '''&lt;span style=&quot;color:steelblue&quot;&gt;Submit color palette paper to VIS&lt;/span&gt;'''<br /> <br /> ===== '''Continuous Colormaps''' =====<br /> * By 1/26: Meet with David and Karen about project (joint with color palette modeling)<br /> * By 1/26: Freeze data collection<br /> * By 2/19: Have a complete, rough paper draft for VIS submission<br /> * By 3/21: Submit abstract to VIS<br /> * By 3/31: '''&lt;span style=&quot;color:steelblue&quot;&gt;Submit color map paper to VIS&lt;/span&gt;'''<br /> <br /> ===== '''Other''' =====<br /> * '''&lt;span style=&quot;color:steelblue&quot;&gt;E-mail updates more than you think you need to (i.e., weekly updates)&lt;/span&gt;'''<br /> * '''&lt;span style=&quot;color:steelblue&quot;&gt;Sign up for Sheridan Center's teaching certification for Fall 2015 semester&lt;/span&gt;'''<br /> * Work on the outcome of the MAGI submission to Nature Methods<br /> * Practice fast writing<br /> <br /> === [[User:Hua Guo|Hua]] ===<br /> <br /> * Thesis proposal<br /> ** Send proposal to committee members<br /> ** Give the proposal talk<br /> <br /> * Interaction history analysis paper<br /> ** Finish preliminary analysis with Markov chain and action / component frequency features (1/31)<br /> ** Submit to VIS (3/31)<br /> <br /> * BraiNet<br /> ** Interface redesign sketched out<br /> <br /> === [[User:Steven Gomez|Steve]] ===<br /> <br /> * Finish crowd-eyetracking project<br /> ** Follow-up MTurk experiment run by '''9/12''', data analyzed by '''9/24''' with Radu &amp;#10003;<br /> ** Circulate updated TVCG draft with results by '''9/30''' and submit '''&lt;s&gt;early October&lt;/s&gt; &amp;#10003;<br /> * Integrating automatic evaluations with github<br /> ** Clean up MTurk scripts to link into git hook by '''&lt;s&gt;mid&lt;/s&gt; end of October''' [in progress]<br /> ** Run case study on alternative vis designs from our VAST 2014 paper by '''end of November'''<br /> ** Draft VIS paper by '''mid December'''<br /> ** Submit '''end of March'''<br /> * Assist Hua with Aptima study and report<br /> ** Report due to Aptima by '''mid October''' &amp;#10003;<br /> ** Outline of paper on individual differences in visualization by '''end of October'''<br /> * Have a good VAST task in Paris (11/9-11/16)<br /> ** Iterate on presentation several times, practice at scivis on '''10/28''' &amp;#10003;<br /> ** Practice talk at Tufts on '''10/29''' &amp;#10003;<br /> ** Network with colleagues at conference &amp;#10003;<br /> * Have a job next fall!<br /> ** List of postdoc opportunities compiled before Paris trip, by '''11/5''' [in progress]<br /> ** Teaching statement from notes by '''end of September''' &amp;#10003;<br /> ** Research statement by '''end of November''' (when git study wraps up)<br /> * Dissertation<br /> ** Tex with outline in private GitHub repo by '''10/1''' &amp;#10003;<br /> ** Follow chapter schedule in my [[Media:DCP_steveg_sanitized.pdf|Brown GS 6th-year proposal (DCP)]]<br /> *** By '''12/8''', draft Chapter 3: Modeling Task Performance with Non-Experts (from CHI '12 paper) &amp;#10003;<br /> *** By '''12/15''', draft Chapter 4: Modeling Gaze Behaviors with Non-Experts (from TVCG paper in submission) &amp;#10003;<br /> *** By '''12/22''', draft Chapter 5: Measuring Insights and Task Performance for Visual Analytics (from VAST '14 paper)<br /> *** By '''1/12''', draft Chapter 6: Crowdsourced Evaluation Framework (from new experiment)<br /> *** By '''1/19''', draft Chapter 7: Conclusions<br /> *** By '''1/26''', draft Chapter 1: Introduction<br /> *** By '''2/9''', draft Chapter 2: Background<br /> *** By '''3/2''', draft 2 of full document done and circulated to committee<br /> *** By '''mid March''', set defense date and time, run through the [http://cs.brown.edu/degrees/doctoral/proposal/Thesis_Proposal_Checklist.pdf thesis checklist]<br /> *** By '''mid April''', defense!<br /> *** '''5/1''': Hard deadline for dissertation submission, &quot;apply to graduate&quot; on Banner<br /> <br /> * Misc<br /> ** Be a helpful TA for CS237 &amp;#10003;<br /> <br /> === [[User:Ryan Cabeen|Ryan]] ===<br /> <br /> * South Africa <br /> ** results created and shared<br /> ** include multi-fiber methods<br /> * Dan pediatric bipolar<br /> ** complete paper writing<br /> ** include region segmentation methods<br /> ** consider potential additional pubs<br /> * Edinburgh<br /> ** make data resource paper<br /> ** option: multi-fiber atlas?<br /> ** option: reproducing aging studies, e.g. STL FBL<br /> * Multi-fiber estimation <br /> ** put on finishing touches on journal paper and submit<br /> * Thesis writing<br /> ** make some progress on introduction<br /> <br /> === [[User:David Laidlaw|David]] ===<br /> <br /> * cave running and with demos and working for may opening<br /> ** cavePainting, advisor, cs137 examples, VT project<br /> ** hw and low-level software testing/reliability plan<br /> ** application software development easier<br /> * longer-term funding progress<br /> ** some specific targets for proposals: cave, cognition, expedition, brains<br /> * full Bowman experiment run by Wesley and/or Johannes in Yurt<br /> * good CS16<br /> * keep all advisees moving along appropriately<br /> <br /> === [[User:Wesley Miller|Wesley]] ===<br /> <br /> === [[User:Johannes Novotny|Johannes]] ===<br /> <br /> ===== Coursework =====<br /> (Currently Shopping)<br /> * HCI Seminar<br /> * Introduction to Data Science<br /> * Introduction to Machine Learning<br /> * Interactive Computer Graphics<br /> <br /> ===== CAVE/YURT =====<br /> * By '''2/1''', Discuss current results with VT and Bireswar<br /> ** Update experiment script vs. keeping current users<br /> * By '''2/8''', fix 90/270 degree virtual walls in VRUI<br /> * By '''2/15''', continue user study at Granoff CAVE<br /> * By '''2/21''', setup complete evaluation framework for statistical significant effects<br /> ** in Google docs or repository to share with Wallace<br /> * By '''3/14''', integrate Scalable into VRUI with Wesley<br /> * By '''3/21''', complete 32 users at Granoff CAVE and YURT<br /> * By '''5/5''', complete all 64 users<br /> <br /> ===== Collaborations =====<br /> * By '''mid February''', set up meetings with prospective collaborators<br /> ** Dereck Merck - 5 minute presentation on 3D US smart visibility at radiology meeting<br /> ** Kristi Wharton - time series confocal microscopy data in the cave<br /> ** search for more collaborators<br /> * By '''mid February''', complete paper for Computers &amp; Geosciences<br /> <br /> <br /> <br /> === [[User:Tom Sgouros|Tom]] ===<br /> <br /> * wrist/thumb<br /> * yurt<br /> <br /> &lt;!-- please don't edit below this line --&gt;<br /> <br /> ----<br /> <br /> == Past Plans and Goals ==<br /> * [[/Fall 2014|Fall '14]]<br /> * [[/Spring-Summer 2014|Spring-Summer '14]]<br /> * [[/Summer-Fall 2013|Summer-Fall '13]]<br /> * [[/Spring 2013|Spring '13]]<br /> * [[/Fall 2012|Fall '12]]<br /> * [[/Summer 2012|Summer '12]]<br /> * [[/Spring 2012|Spring '12]]<br /> * [[/Summer-Fall 2011|Summer-Fall '11]]<br /> * [[/Spring 2011|Spring '11]]<br /> * [[/Summer-Fall 2010|Summer-Fall '10]]<br /> * [[/Spring 2010|Spring '10]]<br /> * [[/Fall 2009|Fall '09]]<br /> * [[/Summer 2009|Summer '09]]<br /> * [[/Spring 2009|Spring '09]]<br /> * [[/Fall 2008|Fall '08]]<br /> * [http://sites.google.com/a/vis.cs.brown.edu/collaboravis/Home/summer-08-group-goals Summer '08]<br /> <br /> [[Category:VRL]]</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Plans_and_Goals&diff=6617 2015-01-21T20:30:03Z

<p>Wesley Miller: /* Wesley */</p> <hr /> <div>On this page the members of the [[VRL]] record and refine their goals for the current semester. This is a living document in which [[dhl]] will provide feedback. See the bottom of the page for links to past plans &amp; goals documents.<br /> <br /> == Current Schedule ==<br /> Meetings are on Mondays. The authoritative list is in dhl's calendar.<br /> <br /> == Current Plans and Goals (Spring '15) ==<br /> <br /> === [[User:Connor Gramazio|Connor]] ===<br /> '''&lt;span style=&quot;color:steelblue&quot;&gt;Boldfaced&lt;/span&gt;''' goals are those that mark the high-level success of each project.<br /> <br /> ===== '''Genomics VIS Project''' =====<br /> * By 1/12 (over break):<br /> ** change abstract to be more of a paper abstract and less of a book abstract<br /> ** make paper skeleton with clear evaluation plans, methods, and expected results<br /> ** determine if making the GD3 Notebook as a third tool is manageable given pre-VIS workload<br /> * By 1/19: '''&lt;span style=&quot;color:steelblue&quot;&gt;Complete and freeze GD3 v1 visualization library development&lt;/span&gt;'''<br /> ** Don't do more than bringing refactored library up to existing capabilities.<br /> * By 1/19: E-mail and recruit &gt;=5 experts for each tool that is being evaluated<br /> * By 2/2: Have all experts scheduled and have the evaluations set in stone and methods/procedure written into paper draft<br /> * By 2/20: '''&lt;span style=&quot;color:steelblue&quot;&gt;Have all evaluation completed and coded&lt;/span&gt;'''<br /> * By 3/9: E-mail David a complete, rough paper draft for VIS submission<br /> * By 3/16: Send out revised draft to all authors<br /> * By 3/21: Submit abstract to VIS and have a paper draft that is submittable<br /> * By 3/31: '''&lt;span style=&quot;color:steelblue&quot;&gt;Submit genomics viz paper to VIS&lt;/span&gt;'''<br /> <br /> ===== '''Color palette picker''' =====<br /> * By 1/12 (over break):<br /> ** Brainstorm a list of possible evaluations with total &gt;= 5 possible evaluations<br /> ** Send an abstract to Karen and David and a one-paragraph description of the evaluation plan<br /> ** Write paper skeleton<br /> * By 1/19: '''&lt;span style=&quot;color:steelblue&quot;&gt;Finish tool&lt;/span&gt;'''<br /> * By 1/26: Have a meeting/demo with David and Karen to get feedback on evaluation<br /> * By 1/26: Run pilot MTurk evaluations on discerinability and preference<br /> * By 2/9: '''&lt;span style=&quot;color:steelblue&quot;&gt;Have complete data from MTurk discernability and preference evaluations&lt;/span&gt;'''<br /> * By 3/2: E-Mail David and Karen a complete, rough paper draft for VIS submission<br /> * By 3/16: Have a submittable draft ready<br /> * By 3/21: Submit abstract to VIS<br /> * By 3/31: '''&lt;span style=&quot;color:steelblue&quot;&gt;Submit color palette paper to VIS&lt;/span&gt;'''<br /> <br /> ===== '''Continuous Colormaps''' =====<br /> * By 1/26: Meet with David and Karen about project (joint with color palette modeling)<br /> * By 1/26: Freeze data collection<br /> * By 2/19: Have a complete, rough paper draft for VIS submission<br /> * By 3/21: Submit abstract to VIS<br /> * By 3/31: '''&lt;span style=&quot;color:steelblue&quot;&gt;Submit color map paper to VIS&lt;/span&gt;'''<br /> <br /> ===== '''Other''' =====<br /> * '''&lt;span style=&quot;color:steelblue&quot;&gt;E-mail updates more than you think you need to (i.e., weekly updates)&lt;/span&gt;'''<br /> * '''&lt;span style=&quot;color:steelblue&quot;&gt;Sign up for Sheridan Center's teaching certification for Fall 2015 semester&lt;/span&gt;'''<br /> * Work on the outcome of the MAGI submission to Nature Methods<br /> * Practice fast writing<br /> <br /> === [[User:Hua Guo|Hua]] ===<br /> <br /> * Thesis proposal<br /> ** Send proposal to committee members<br /> ** Give the proposal talk<br /> <br /> * Interaction history analysis paper<br /> ** Finish preliminary analysis with Markov chain and action / component frequency features (1/31)<br /> ** Submit to VIS (3/31)<br /> <br /> * BraiNet<br /> ** Interface redesign sketched out<br /> <br /> === [[User:Steven Gomez|Steve]] ===<br /> <br /> * Finish crowd-eyetracking project<br /> ** Follow-up MTurk experiment run by '''9/12''', data analyzed by '''9/24''' with Radu &amp;#10003;<br /> ** Circulate updated TVCG draft with results by '''9/30''' and submit '''&lt;s&gt;early October&lt;/s&gt; &amp;#10003;<br /> * Integrating automatic evaluations with github<br /> ** Clean up MTurk scripts to link into git hook by '''&lt;s&gt;mid&lt;/s&gt; end of October''' [in progress]<br /> ** Run case study on alternative vis designs from our VAST 2014 paper by '''end of November'''<br /> ** Draft VIS paper by '''mid December'''<br /> ** Submit '''end of March'''<br /> * Assist Hua with Aptima study and report<br /> ** Report due to Aptima by '''mid October''' &amp;#10003;<br /> ** Outline of paper on individual differences in visualization by '''end of October'''<br /> * Have a good VAST task in Paris (11/9-11/16)<br /> ** Iterate on presentation several times, practice at scivis on '''10/28''' &amp;#10003;<br /> ** Practice talk at Tufts on '''10/29''' &amp;#10003;<br /> ** Network with colleagues at conference &amp;#10003;<br /> * Have a job next fall!<br /> ** List of postdoc opportunities compiled before Paris trip, by '''11/5''' [in progress]<br /> ** Teaching statement from notes by '''end of September''' &amp;#10003;<br /> ** Research statement by '''end of November''' (when git study wraps up)<br /> * Dissertation<br /> ** Tex with outline in private GitHub repo by '''10/1''' &amp;#10003;<br /> ** Follow chapter schedule in my [[Media:DCP_steveg_sanitized.pdf|Brown GS 6th-year proposal (DCP)]]<br /> *** By '''12/8''', draft Chapter 3: Modeling Task Performance with Non-Experts (from CHI '12 paper) &amp;#10003;<br /> *** By '''12/15''', draft Chapter 4: Modeling Gaze Behaviors with Non-Experts (from TVCG paper in submission) &amp;#10003;<br /> *** By '''12/22''', draft Chapter 5: Measuring Insights and Task Performance for Visual Analytics (from VAST '14 paper)<br /> *** By '''1/12''', draft Chapter 6: Crowdsourced Evaluation Framework (from new experiment)<br /> *** By '''1/19''', draft Chapter 7: Conclusions<br /> *** By '''1/26''', draft Chapter 1: Introduction<br /> *** By '''2/9''', draft Chapter 2: Background<br /> *** By '''3/2''', draft 2 of full document done and circulated to committee<br /> *** By '''mid March''', set defense date and time, run through the [http://cs.brown.edu/degrees/doctoral/proposal/Thesis_Proposal_Checklist.pdf thesis checklist]<br /> *** By '''mid April''', defense!<br /> *** '''5/1''': Hard deadline for dissertation submission, &quot;apply to graduate&quot; on Banner<br /> <br /> * Misc<br /> ** Be a helpful TA for CS237 &amp;#10003;<br /> <br /> === [[User:Ryan Cabeen|Ryan]] ===<br /> <br /> * South Africa <br /> ** results created and shared<br /> ** include multi-fiber methods<br /> * Dan pediatric bipolar<br /> ** complete paper writing<br /> ** include region segmentation methods<br /> ** consider potential additional pubs<br /> * Edinburgh<br /> ** make data resource paper<br /> ** option: multi-fiber atlas?<br /> ** option: reproducing aging studies, e.g. STL FBL<br /> * Multi-fiber estimation <br /> ** put on finishing touches on journal paper and submit<br /> * Thesis writing<br /> ** make some progress on introduction<br /> <br /> === [[User:David Laidlaw|David]] ===<br /> <br /> * cave running and with demos and working for may opening<br /> ** cavePainting, advisor, cs137 examples, VT project<br /> ** hw and low-level software testing/reliability plan<br /> ** application software development easier<br /> * longer-term funding progress<br /> ** some specific targets for proposals: cave, cognition, expedition, brains<br /> * full Bowman experiment run by Wesley and/or Johannes in Yurt<br /> * good CS16<br /> * keep all advisees moving along appropriately<br /> <br /> === [[User:Wesley Miller|Wesley]] ===<br /> <br /> * Choose and complete one of CSCI2300 or CSCI2240 <br /> * Modify Vrui to run with Scalable in the YURT<br /> ** Prototype by 3/14<br /> * Modify Vrui to have the virtual walls vislet<br /> ** Done by 2/8<br /> * Continue isosurface project<br /> ** Meting with collaborators about differing results so far by 2/1<br /> ** Complete statistical analysis framework with Johannes by 2/21<br /> ** Study 32 students by 3/21<br /> ** Study 32 more students by 5/5<br /> * Explore more avenues for independent research<br /> ** Gather information for discussion with David by 2/9<br /> <br /> === [[User:Johannes Novotny|Johannes]] ===<br /> <br /> * complete CSCI2370 Interdisciplinary Scientific Visualization<br /> ** get some experience working with the CAVE (and if possible YURT)<br /> * complete CSCI2951-B Data-Driven Vision and Graphics<br /> * complete Programming Comps<br /> * collect ideas for the Research Comps (or use master thesis if possible)<br /> <br /> <br /> === [[User:Tom Sgouros|Tom]] ===<br /> <br /> * wrist/thumb<br /> * yurt<br /> <br /> &lt;!-- please don't edit below this line --&gt;<br /> <br /> ----<br /> <br /> == Past Plans and Goals ==<br /> * [[/Fall 2014|Fall '14]]<br /> * [[/Spring-Summer 2014|Spring-Summer '14]]<br /> * [[/Summer-Fall 2013|Summer-Fall '13]]<br /> * [[/Spring 2013|Spring '13]]<br /> * [[/Fall 2012|Fall '12]]<br /> * [[/Summer 2012|Summer '12]]<br /> * [[/Spring 2012|Spring '12]]<br /> * [[/Summer-Fall 2011|Summer-Fall '11]]<br /> * [[/Spring 2011|Spring '11]]<br /> * [[/Summer-Fall 2010|Summer-Fall '10]]<br /> * [[/Spring 2010|Spring '10]]<br /> * [[/Fall 2009|Fall '09]]<br /> * [[/Summer 2009|Summer '09]]<br /> * [[/Spring 2009|Spring '09]]<br /> * [[/Fall 2008|Fall '08]]<br /> * [http://sites.google.com/a/vis.cs.brown.edu/collaboravis/Home/summer-08-group-goals Summer '08]<br /> <br /> [[Category:VRL]]</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=ADVISER&diff=6571 2014-12-15T18:57:47Z

<p>Wesley Miller: /* Implementation Plans */</p> <hr /> <div><br /> == Feature Wishlist ==<br /> <br /> The following is a list of desired features of ADVISER as specified by [http://www.planetary.brown.edu/research_associate/Dickson/jld-index.html Jay Dickson].<br /> <br /> * Incorporation of layering of multiple data sets within one CAVE session<br /> * Activation of tools (beacon drops, profile extraction, &quot;slicing&quot; a cross-section of a surface... some of these tools are still available in the desktop version of ADVISER)<br /> * Ability to record movies within the CAVE<br /> * Exporting of coordinate information from beacons defined by user<br /> * Ability to incorporate time-series data in the CAVE; run animations from time-dependent data sets<br /> * Re-incorporation of geospatial model results; ability to change starting conditions on the fly<br /> <br /> The following is a list of desired features of ADVISER as specified by [http://www.planetary.brown.edu/html_pages/head.htm James Head].<br /> <br /> *Beacon dropping and profile generation on the fly<br /> *Layering of multiple datasets (the ability to turn on/off high resolution data, color data, etc.)<br /> *Dynamic contrast stretching of image data<br /> *Real-time modification of vertical exaggeration<br /> *Display of lat/lon coordinate values synced with the pointer<br /> *Screenshot exports that can be opened on a desktop workstation<br /> <br /> == Implementation Plans ==<br /> <br /> The following is a list of implementation plans and specifics.<br /> <br /> * Implement data layering<br /> * Implement image stretching<br /> <br /> The following is a list of implementation tasks that have been completed.<br /> <br /> * Port ADVISER base to VRG3D<br /> <br /> == Papers ==<br /> <br /> The following is a list of papers that that were produced from the efforts in developing the ADVISER immersive virtual reality toolkit. [http://www.planetary.brown.edu/html_pages/head.htm Jim Head] and his colleagues involved in planetary geology research are very interested in pressing on with visualization collaborators to resurrect ADVISER.<br /> <br /> * [http://www.planetary.brown.edu/pdfs/3266.pdf Forsberg, A., Prabhat, G. Haley, A. Bragdon, J. Levy, C. I. Fassett, D. E. Shean, J. W. Head, S. M. Milkovich, and M. A. Duchaineau (2006), ADVISER: Immersive field work for planetary geoscientists, IEEE Computer Graphics and Applications, 26, 46-54, doi: 10.1109/MCG.2006.73.]<br /> <br /> * [http://www.planetary.brown.edu/pdfs/3128.pdf Head, J. W., A. van Dam, S. Fulcomer, A. Forsberg, Prabhat, G. Rosser, and S. M. Milkovich (2005), ADVISER: Immersive Scientific Visualization Applied to Mars Research and Exploration, Photogrammetric Engineering and Remote Sensing, 71, 1219–1225.]<br /> <br /> * [http://www.planetary.brown.edu/pdfs/3952.pdf Huffman, J., A. Forsberg, A. C. Loomis, J. W. Head III, J. L. Dickson, and C. I. Fassett (2011), Integrating advanced visualization technology into the planetary geoscience workflow, Planet. Space Sci., 59, 1273-1279, doi:10.1016/j.pss.2010.07.015.]</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=ADVISER&diff=6569 2014-12-12T20:57:22Z

<p>Wesley Miller: /* Implementation Plans */ added top two desired tools</p> <hr /> <div><br /> == Feature Wishlist ==<br /> <br /> The following is a list of desired features of ADVISER as specified by [http://www.planetary.brown.edu/research_associate/Dickson/jld-index.html Jay Dickson].<br /> <br /> * Incorporation of layering of multiple data sets within one CAVE session<br /> * Activation of tools (beacon drops, profile extraction, &quot;slicing&quot; a cross-section of a surface... some of these tools are still available in the desktop version of ADVISER)<br /> * Ability to record movies within the CAVE<br /> * Exporting of coordinate information from beacons defined by user<br /> * Ability to incorporate time-series data in the CAVE; run animations from time-dependent data sets<br /> * Re-incorporation of geospatial model results; ability to change starting conditions on the fly<br /> <br /> The following is a list of desired features of ADVISER as specified by [http://www.planetary.brown.edu/html_pages/head.htm James Head].<br /> <br /> *Beacon dropping and profile generation on the fly<br /> *Layering of multiple datasets (the ability to turn on/off high resolution data, color data, etc.)<br /> *Dynamic contrast stretching of image data<br /> *Real-time modification of vertical exaggeration<br /> *Display of lat/lon coordinate values synced with the pointer<br /> *Screenshot exports that can be opened on a desktop workstation<br /> <br /> == Implementation Plans ==<br /> <br /> The following is a list of implementation plans and specifics.<br /> <br /> * Port ADVISER to VRG3D<br /> * Implement layering of data<br /> * Implement stretching of images<br /> <br /> == Papers ==<br /> <br /> The following is a list of papers that that were produced from the efforts in developing the ADVISER immersive virtual reality toolkit. [http://www.planetary.brown.edu/html_pages/head.htm Jim Head] and his colleagues involved in planetary geology research are very interested in pressing on with visualization collaborators to resurrect ADVISER.<br /> <br /> * [http://www.planetary.brown.edu/pdfs/3266.pdf Forsberg, A., Prabhat, G. Haley, A. Bragdon, J. Levy, C. I. Fassett, D. E. Shean, J. W. Head, S. M. Milkovich, and M. A. Duchaineau (2006), ADVISER: Immersive field work for planetary geoscientists, IEEE Computer Graphics and Applications, 26, 46-54, doi: 10.1109/MCG.2006.73.]<br /> <br /> * [http://www.planetary.brown.edu/pdfs/3128.pdf Head, J. W., A. van Dam, S. Fulcomer, A. Forsberg, Prabhat, G. Rosser, and S. M. Milkovich (2005), ADVISER: Immersive Scientific Visualization Applied to Mars Research and Exploration, Photogrammetric Engineering and Remote Sensing, 71, 1219–1225.]<br /> <br /> * [http://www.planetary.brown.edu/pdfs/3952.pdf Huffman, J., A. Forsberg, A. C. Loomis, J. W. Head III, J. L. Dickson, and C. I. Fassett (2011), Integrating advanced visualization technology into the planetary geoscience workflow, Planet. Space Sci., 59, 1273-1279, doi:10.1016/j.pss.2010.07.015.]</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=ADVISER&diff=6568 2014-12-12T20:54:59Z

<p>Wesley Miller: /* Feature Wishlist */ added Jim Head&#039;s list</p> <hr /> <div><br /> == Feature Wishlist ==<br /> <br /> The following is a list of desired features of ADVISER as specified by [http://www.planetary.brown.edu/research_associate/Dickson/jld-index.html Jay Dickson].<br /> <br /> * Incorporation of layering of multiple data sets within one CAVE session<br /> * Activation of tools (beacon drops, profile extraction, &quot;slicing&quot; a cross-section of a surface... some of these tools are still available in the desktop version of ADVISER)<br /> * Ability to record movies within the CAVE<br /> * Exporting of coordinate information from beacons defined by user<br /> * Ability to incorporate time-series data in the CAVE; run animations from time-dependent data sets<br /> * Re-incorporation of geospatial model results; ability to change starting conditions on the fly<br /> <br /> The following is a list of desired features of ADVISER as specified by [http://www.planetary.brown.edu/html_pages/head.htm James Head].<br /> <br /> *Beacon dropping and profile generation on the fly<br /> *Layering of multiple datasets (the ability to turn on/off high resolution data, color data, etc.)<br /> *Dynamic contrast stretching of image data<br /> *Real-time modification of vertical exaggeration<br /> *Display of lat/lon coordinate values synced with the pointer<br /> *Screenshot exports that can be opened on a desktop workstation<br /> <br /> == Implementation Plans ==<br /> <br /> The following is a list of implementation plans and specifics.<br /> <br /> * Port ADVISER to VRG3D<br /> <br /> == Papers ==<br /> <br /> The following is a list of papers that that were produced from the efforts in developing the ADVISER immersive virtual reality toolkit. [http://www.planetary.brown.edu/html_pages/head.htm Jim Head] and his colleagues involved in planetary geology research are very interested in pressing on with visualization collaborators to resurrect ADVISER.<br /> <br /> * [http://www.planetary.brown.edu/pdfs/3266.pdf Forsberg, A., Prabhat, G. Haley, A. Bragdon, J. Levy, C. I. Fassett, D. E. Shean, J. W. Head, S. M. Milkovich, and M. A. Duchaineau (2006), ADVISER: Immersive field work for planetary geoscientists, IEEE Computer Graphics and Applications, 26, 46-54, doi: 10.1109/MCG.2006.73.]<br /> <br /> * [http://www.planetary.brown.edu/pdfs/3128.pdf Head, J. W., A. van Dam, S. Fulcomer, A. Forsberg, Prabhat, G. Rosser, and S. M. Milkovich (2005), ADVISER: Immersive Scientific Visualization Applied to Mars Research and Exploration, Photogrammetric Engineering and Remote Sensing, 71, 1219–1225.]<br /> <br /> * [http://www.planetary.brown.edu/pdfs/3952.pdf Huffman, J., A. Forsberg, A. C. Loomis, J. W. Head III, J. L. Dickson, and C. I. Fassett (2011), Integrating advanced visualization technology into the planetary geoscience workflow, Planet. Space Sci., 59, 1273-1279, doi:10.1016/j.pss.2010.07.015.]</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=User:Wesley_Miller&diff=6567 2014-12-12T20:46:32Z

<p>Wesley Miller: </p> <hr /> <div>Master's student working on CAVE stuff</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=ADVISER&diff=6566 2014-11-17T21:03:25Z

<p>Wesley Miller: added Implementation Plans section</p> <hr /> <div><br /> == Feature Wishlist ==<br /> <br /> The following is a list of desired features of ADVISER as specified by [http://www.planetary.brown.edu/research_associate/Dickson/jld-index.html Jay Dickson].<br /> <br /> * Incorporation of layering of multiple data sets within one CAVE session<br /> * Activation of tools (beacon drops, profile extraction, &quot;slicing&quot; a cross-section of a surface... some of these tools are still available in the desktop version of ADVISER)<br /> * Ability to record movies within the CAVE<br /> * Exporting of coordinate information from beacons defined by user<br /> * Ability to incorporate time-series data in the CAVE; run animations from time-dependent data sets<br /> * Re-incorporation of geospatial model results; ability to change starting conditions on the fly<br /> <br /> == Implementation Plans ==<br /> <br /> The following is a list of implementation plans and specifics.<br /> <br /> * Port ADVISER to VRG3D<br /> <br /> == Papers ==<br /> <br /> The following is a list of papers that that were produced from the efforts in developing the ADVISER immersive virtual reality toolkit. [http://www.planetary.brown.edu/html_pages/head.htm Jim Head] and his colleagues involved in planetary geology research are very interested in pressing on with visualization collaborators to resurrect ADVISER.<br /> <br /> * [http://www.planetary.brown.edu/pdfs/3266.pdf Forsberg, A., Prabhat, G. Haley, A. Bragdon, J. Levy, C. I. Fassett, D. E. Shean, J. W. Head, S. M. Milkovich, and M. A. Duchaineau (2006), ADVISER: Immersive field work for planetary geoscientists, IEEE Computer Graphics and Applications, 26, 46-54, doi: 10.1109/MCG.2006.73.]<br /> <br /> * [http://www.planetary.brown.edu/pdfs/3128.pdf Head, J. W., A. van Dam, S. Fulcomer, A. Forsberg, Prabhat, G. Rosser, and S. M. Milkovich (2005), ADVISER: Immersive Scientific Visualization Applied to Mars Research and Exploration, Photogrammetric Engineering and Remote Sensing, 71, 1219–1225.]<br /> <br /> * [http://www.planetary.brown.edu/pdfs/3952.pdf Huffman, J., A. Forsberg, A. C. Loomis, J. W. Head III, J. L. Dickson, and C. I. Fassett (2011), Integrating advanced visualization technology into the planetary geoscience workflow, Planet. Space Sci., 59, 1273-1279, doi:10.1016/j.pss.2010.07.015.]</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=ADVISER&diff=6565 2014-11-15T15:56:19Z

<p>Wesley Miller: added links to Jim Head&#039;s and Jay Dickson&#039;s homepages</p> <hr /> <div><br /> == Feature Wishlist ==<br /> <br /> The following is a list of desired features of ADVISER as specified by [http://www.planetary.brown.edu/research_associate/Dickson/jld-index.html Jay Dickson].<br /> <br /> * Incorporation of layering of multiple data sets within one CAVE session<br /> * Activation of tools (beacon drops, profile extraction, &quot;slicing&quot; a cross-section of a surface... some of these tools are still available in the desktop version of ADVISER)<br /> * Ability to record movies within the CAVE<br /> * Exporting of coordinate information from beacons defined by user<br /> * Ability to incorporate time-series data in the CAVE; run animations from time-dependent data sets<br /> * Re-incorporation of geospatial model results; ability to change starting conditions on the fly<br /> <br /> == Papers ==<br /> <br /> The following is a list of papers that that were produced from the efforts in developing the ADVISER immersive virtual reality toolkit. [http://www.planetary.brown.edu/html_pages/head.htm Jim Head] and his colleagues involved in planetary geology research are very interested in pressing on with visualization collaborators to resurrect ADVISER.<br /> <br /> * [http://www.planetary.brown.edu/pdfs/3266.pdf Forsberg, A., Prabhat, G. Haley, A. Bragdon, J. Levy, C. I. Fassett, D. E. Shean, J. W. Head, S. M. Milkovich, and M. A. Duchaineau (2006), ADVISER: Immersive field work for planetary geoscientists, IEEE Computer Graphics and Applications, 26, 46-54, doi: 10.1109/MCG.2006.73.]<br /> <br /> * [http://www.planetary.brown.edu/pdfs/3128.pdf Head, J. W., A. van Dam, S. Fulcomer, A. Forsberg, Prabhat, G. Rosser, and S. M. Milkovich (2005), ADVISER: Immersive Scientific Visualization Applied to Mars Research and Exploration, Photogrammetric Engineering and Remote Sensing, 71, 1219–1225.]<br /> <br /> * [http://www.planetary.brown.edu/pdfs/3952.pdf Huffman, J., A. Forsberg, A. C. Loomis, J. W. Head III, J. L. Dickson, and C. I. Fassett (2011), Integrating advanced visualization technology into the planetary geoscience workflow, Planet. Space Sci., 59, 1273-1279, doi:10.1016/j.pss.2010.07.015.]</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=ADVISER&diff=6564 2014-11-15T15:52:58Z

<p>Wesley Miller: added feature wishlist as specified by Jay Dickson</p> <hr /> <div><br /> == Feature Wishlist ==<br /> <br /> The following is a list of desired features of ADVISER as specified by Jay Dickson.<br /> <br /> * Incorporation of layering of multiple data sets within one CAVE session<br /> * Activation of tools (beacon drops, profile extraction, &quot;slicing&quot; a cross-section of a surface... some of these tools are still available in the desktop version of ADVISER)<br /> * Ability to record movies within the CAVE<br /> * Exporting of coordinate information from beacons defined by user<br /> * Ability to incorporate time-series data in the CAVE; run animations from time-dependent data sets<br /> * Re-incorporation of geospatial model results; ability to change starting conditions on the fly<br /> <br /> == Papers ==<br /> <br /> The following is a list of papers that that were produced from the efforts in developing the ADVISER immersive virtual reality toolkit. Jim Head and his colleagues involved in planetary geology research are very interested in pressing on with visualization collaborators to resurrect ADVISER.<br /> <br /> * [http://www.planetary.brown.edu/pdfs/3266.pdf Forsberg, A., Prabhat, G. Haley, A. Bragdon, J. Levy, C. I. Fassett, D. E. Shean, J. W. Head, S. M. Milkovich, and M. A. Duchaineau (2006), ADVISER: Immersive field work for planetary geoscientists, IEEE Computer Graphics and Applications, 26, 46-54, doi: 10.1109/MCG.2006.73.]<br /> <br /> * [http://www.planetary.brown.edu/pdfs/3128.pdf Head, J. W., A. van Dam, S. Fulcomer, A. Forsberg, Prabhat, G. Rosser, and S. M. Milkovich (2005), ADVISER: Immersive Scientific Visualization Applied to Mars Research and Exploration, Photogrammetric Engineering and Remote Sensing, 71, 1219–1225.]<br /> <br /> * [http://www.planetary.brown.edu/pdfs/3952.pdf Huffman, J., A. Forsberg, A. C. Loomis, J. W. Head III, J. L. Dickson, and C. I. Fassett (2011), Integrating advanced visualization technology into the planetary geoscience workflow, Planet. Space Sci., 59, 1273-1279, doi:10.1016/j.pss.2010.07.015.]</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=ADVISER&diff=6563 2014-11-15T15:48:06Z

<p>Wesley Miller: structured page and added list of papers</p> <hr /> <div><br /> == Feature Wishlist ==<br /> <br /> <br /> <br /> == Papers ==<br /> <br /> The following is a list of papers that that were produced from the efforts in developing the ADVISER immersive virtual reality toolkit. Jim Head and his colleagues involved in planetary geology research are very interested in pressing on with visualization collaborators to resurrect ADVISER.<br /> <br /> * [http://www.planetary.brown.edu/pdfs/3266.pdf Forsberg, A., Prabhat, G. Haley, A. Bragdon, J. Levy, C. I. Fassett, D. E. Shean, J. W. Head, S. M. Milkovich, and M. A. Duchaineau (2006), ADVISER: Immersive field work for planetary geoscientists, IEEE Computer Graphics and Applications, 26, 46-54, doi: 10.1109/MCG.2006.73.]<br /> <br /> * [http://www.planetary.brown.edu/pdfs/3128.pdf Head, J. W., A. van Dam, S. Fulcomer, A. Forsberg, Prabhat, G. Rosser, and S. M. Milkovich (2005), ADVISER: Immersive Scientific Visualization Applied to Mars Research and Exploration, Photogrammetric Engineering and Remote Sensing, 71, 1219–1225.]<br /> <br /> * [http://www.planetary.brown.edu/pdfs/3952.pdf Huffman, J., A. Forsberg, A. C. Loomis, J. W. Head III, J. L. Dickson, and C. I. Fassett (2011), Integrating advanced visualization technology into the planetary geoscience workflow, Planet. Space Sci., 59, 1273-1279, doi:10.1016/j.pss.2010.07.015.]</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Software_tests&diff=6454 2013-12-22T05:53:47Z

<p>Wesley Miller: /* Running Tests */</p> <hr /> <div>== Running Tests ==<br /> <br /> The test driver is installed on all CS department machines. A configuration file is used to launch tests and mail results to subscribers. You can subscribe to a test summary or receive notices when select tests fail. The default configuration file is: &lt;tt&gt;$G/common/build/site/test.platform.cfg&lt;/tt&gt;<br /> <br /> If you want to perform a private test run and suppress mail notifications run:<br /> <br /> &lt;pre&gt;<br /> $ ./common/build/valid/test.platform.py -noemail<br /> &lt;/pre&gt;<br /> <br /> &lt;pre&gt;<br /> &gt; /systest/bin/vrl_fast -noemail<br /> &lt;/pre&gt;<br /> <br /> To run a set of select tests and specify alternative mail notifications (usually to yourself) you can create and run using a custom configuration file. Make a private copy of the default configuration file and modify it. The comments in the default configuration file describe the format. Then run using the new configuration:<br /> <br /> &lt;pre&gt;<br /> &gt; /systest/bin/vrl_fast -config &lt;My work area&gt;/&lt;Custom configuration&gt;.cfg<br /> &lt;/pre&gt;<br /> <br /> Here is an example of a small custom configuration file.<br /> <br /> &lt;pre&gt;<br /> ######################### test.platform.fast.cfg #############################<br /> #<br /> Developer: you@cs.brown.edu<br /> Summary: none<br /> <br /> nag none linux common/build/valid/test.project.py common/include/nag<br /> libnr none linux common/build/valid/test.project.py common/gg/libnr<br /> libgg none linux common/build/valid/test.project.py common/gg/libgg<br /> libds none linux common/build/valid/test.project.py common/gg/libds<br /> libggpp none linux common/build/valid/test.project.py common/gg/libggpp<br /> libnum none linux common/build/valid/test.project.py common/gg/libnum<br /> libcff2 none linux common/build/valid/test.project.py common/gg/libcff2<br /> libmri none linux common/build/valid/test.project.py common/mri/libmri<br /> <br /> #<br /> ####################### end test.platform.fast.cfg ##########################<br /> &lt;/pre&gt;<br /> <br /> == Writing Tests ==<br /> <br /> It is a good idea to provide one or more quick tests that can be included in the test suite we run each night. Tests need to run in batch mode and simply return a zero status if successful and non-zero if they fail.<br /> <br /> Create a make test target that runs a test that returns a zero status for success and a non-zero status for an error. The test should be able to run as a batch job (not interactive). Projects with multiple tests can use a target named &lt;tt&gt;test.&lt;name&gt;&lt;/tt&gt; for each individual test and a target &lt;tt&gt;alltest&lt;/tt&gt; to run them all.<br /> <br /> Test targets should limit themselves to commands supported on both linux and Windows or use Python scripts. Currently only the &quot;rm -f&quot; and &quot;diff&quot; commands are supported. As always, absolute path names are to be avoided.<br /> <br /> Large raw input files such as MRI images should be copied to a directory named &lt;tt&gt;$GROOT/data/&lt;project&gt;/test/&lt;/tt&gt;. Cooked data and test output should go to a test directory inside the project directory. Tests should clear output files from prior runs to avoid false positives. Regression tests that use diff to check output should comapare against a file named: &lt;tt&gt;&lt;root name&gt;_base.&lt;suffix&gt;&lt;/tt&gt;<br /> <br /> <br /> == Test System Maintenance ==<br /> <br /> THe directories and files manages by tStaff are:<br /> <br /> /tstaff/bin/regtest # tStaff manages the driver.<br /> /systest/bin/* # Run only the links; excludes other files.<br /> <br /> /systest/bin/: Changes are reflected to all department machines.<br /> The build64 and build32 machines have separate test links.<br /> <br /> Systest commands:<br /> <br /> &gt; systest-info -A # print all project info<br /> CTime: 1235158613<br /> Description: Test software for the VRL group.<br /> Links: bin/vrl_test<br /> MTime: 1236091161<br /> Name: vrltest<br /> Owners: bb dhl<br /> <br /> <br /> # Select project: To add type in a project name and hit &quot;Create&quot;.<br /> # Create Project: Description: Enter a brief description.<br /> # Owners: Enter space separated user ids.<br /> # Prject name = vrl -&gt; creates /systest/projects/vrl<br /> #<br /> &gt; systest-req # Interactive box to add a new project (run on Linux box).<br /> <br /> <br /> # Run after creating a new project and set up a test script:<br /> # add: /systest/projects/&lt;project&gt;/&lt;test&gt;.&lt;suffix&gt;<br /> #<br /> &gt; systest-link /systest/projects/&lt;project&gt;/&lt;test_name&gt;.&lt;suffix&gt; /systest/bin/&lt;test_name&gt;<br /> <br /> <br /> # Run after creating a new project and set up a test script:<br /> # add: /systest/projects/&lt;project&gt;/&lt;test&gt;.&lt;suffix&gt;<br /> #<br /> &gt; systest-link /systest/projects/&lt;project&gt;/&lt;test_name&gt;.&lt;suffix&gt; /systest/bin/&lt;test_name&gt;<br /> <br /> <br /> [[Category:HOWTO]][[Category:$G HOWTO]][[Category:Software Development]]</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Building_CavePainting&diff=6451 2013-12-17T03:31:41Z

<p>Wesley Miller: /* Setting Up and Checking Everything Out */ sourceforge restructuring</p> <hr /> <div>Currently, this has only been tested and shown to work on the CCV test curved wall at 94 Waterman.<br /> <br /> == Setting Up and Checking Everything Out ==<br /> <br /> #cd $G<br /> #*Before performing this step define $G as your sandbox directory and define CVSROOT as your username@ssh.cs.brown.edu:/research/graphics/cvsroot/<br /> #**An example can be found at [[Set_up_your_environment_for_diffusion_MRI_processing#Set_up_your_environment]]<br /> #**The file which you must edit may vary on different operating systems<br /> #cvs co common<br /> #cvs co project<br /> #cvs co import<br /> #mkdir install_linux<br /> #cd $G/import<br /> #svn co https://svn.code.sf.net/p/vrg3d/code/ vrg3d<br /> <br /> == Installing [[VRPN]] ==<br /> <br /> #cd $G/import/vrpn/kit<br /> #unzip vrpn_07_26.zip<br /> #cd $G/import/vrpn/kit/quat<br /> #make<br /> #*Before performing this step<br /> #**Edit the Makefile<br /> #***Uncomment the line corresponding to your machine's architecture<br /> #***Change INSTALL_DIR on line 31 from /usr/local to $G/install_linux<br /> #make install<br /> #cd $G/import/vrpn/kit/vrpn<br /> #make<br /> #*Before performing this step<br /> #**Edit the Makefile<br /> #***Uncomment the line corresponding to your machine's architecture<br /> #***Change INSTALL_DIR on line 52 from /usr/local to $G/install_linux<br /> #make install<br /> #cd $G/import/vrpn/kit/vrpn/server_src<br /> #make<br /> #*Before performing this step<br /> #**Edit the Makefile<br /> #***Uncomment the line corresponding to your machine's architecture<br /> #***Change INSTALL_DIR on line 29 from /usr/local to $G/install_linux<br /> #make install<br /> <br /> == Installing [[G3D]] ==<br /> <br /> #cd $G/import/g3d/kit<br /> #unzip G3D-8.01-src_cvs.zip<br /> #cd $G/import/g3d/kit/G3D<br /> #./buildg3d &lt;nowiki&gt;--&lt;/nowiki&gt;install update<br /> #*Before performing this step<br /> #**Edit buildg3d<br /> #***Change installDir on line 105 from '/usr/local' to '$G/install_linux'<br /> #****Actually type in the directory path of $G for this<br /> #***Comment out line 362 &quot;&lt;nowiki&gt;if osx or (ice.utils.shell(&quot;locate libzip.a&quot;) == ''):&lt;/nowiki&gt;&quot;<br /> #***Remove one indent from line 363<br /> #*If you encounter an error related to usleep, a discussion of this bug can be found [https://groups.google.com/forum/#!topic/g3d-users/BwslmuzAs44 here]<br /> #./buildg3d &lt;nowiki&gt;--&lt;/nowiki&gt;install lib<br /> <br /> == Configuring [[VRG3D]] ==<br /> [http://vis.cs.brown.edu/resources/doc/VRG3D/index.html VRG3D Documentation]<br /> #cd $G/import/vrg3d/vrg3d<br /> #python configure.py -vrpn $G/install_linux -g3d $G/install_linux -vrg3d $G/install_linux<br /> #*If working on a 64 bit system, edit configure.py and make the following replacements before running this command<br /> #**lib/libSDL to lib64/libSDL<br /> #**lib/libGLU to lib64/libGLU<br /> #***If you're on the Brown CS system, you may have to substitute /lib with /lib/x86_64-linux-gnu<br /> #make allclean<br /> #make all<br /> #make install<br /> <br /> == Installing [[MMotion]] ==<br /> <br /> #cd $G/common/MMotion<br /> #make<br /> #*If you get an error with this command edit the $G/common/build/make/compile.gcc.local.make<br /> #**Comment out $(GCC2_SUFFIX) on lines 50 - 53<br /> #**Comment out $(GCC3_SUFFIX) on lines 64 - 67<br /> #**Comment out $(GCC4_SUFFIX) on lines 90 - 93<br /> #**Comment out $(GCCX_SUFFIX) on lines 104 - 107<br /> #*If the environment variable GARCH is not set, set it, or you will be prompted to do so<br /> #make install<br /> <br /> == Installing Common [[Kuchora]] Packages ==<br /> <br /> #cd $G/common/kuchora<br /> #make<br /> #*Before performing this step the second time<br /> #**Edit $G/common/kuchora/base/KuchoraBaseApp.H and make the following replacements before running this command:<br /> #***&quot;_camera&quot; to &quot;_cameras[0]&quot; on line 42<br /> #make install<br /> <br /> == Installing [[CavePainting]] ==<br /> <br /> #cd $G/project/kuchora/cavepainting<br /> #make<br /> #*If you get an error about missing -lGLG3D<br /> #**Change &quot;$(G_IMPORT)/g3d/g3d_8_$(G_COMPILER)&quot; in $G/common/build/make/g3d.make on line 20 and &quot;$(G_IMPORT)/g3d/g3d_8.01_$(G_COMPILER)_64&quot; on line 17 to &quot;$(G)/install_linux&quot; <br /> #*If you get an error about missing -lvrg3d:<br /> #**Substitute lib64 with lib on line 18 of $G/common/build/make/vrg3d.make. The sed command 's/lib64/lib/g' should fix this.<br /> #make install<br /> <br /> == Allowing [[CavePainting]] to be Executed ==<br /> <br /> #cd $G/project/kuchora/cavepainting<br /> #chmod 775 run<br /> <br /> == Moving Files and Creating Symbolic Links to Work With Directory Structure ==<br /> <br /> #mkdir $G/project/kuchora/apps/<br /> #cd $G/project/kuchora/apps/<br /> #mv $G/project/kuchora/cavepainting/ $G/project/kuchora/apps/cavepainting<br /> #cd $G/project/kuchora/<br /> #ln -s $G/project/kuchora/apps/cavepainting/ cavepainting<br /> #cd $G/project/kuchora/<br /> #ln -s $G/common/kuchora/data/ kdata<br /> #mkdir $G/lib/<br /> #mkdir $G/lib/kuchora/<br /> #cd $G/lib/kuchora/<br /> #ln -s $G/project/kuchora/kdata/images/ images<br /> #cd $G/lib/kuchora/<br /> #ln -s $G/project/kuchora/kdata/fonts/ fonts<br /> <br /> == Running [[CavePainting]] in Desktop Mode ==<br /> <br /> [[Image:Screenshot from 2012-07-10 11_25_58.png|right|thumb|CavePainting Running in Desktop Mode]]<br /> #cd $G/project/kuchora/apps/cavepainting<br /> #./run desktop<br /> <br /> [[Category:CavePainting]][[Category:Software]][[Category:Art and Visualization]][[Category:CavePainting HOWTO]]</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Integrating_Scalable_with_ParaView&diff=6446 2013-10-06T01:45:50Z

<p>Wesley Miller: </p> <hr /> <div># Define your ParaView source directory as $G<br /> # edit $G/VTK/Rendering/OpenGL/vtkXOpenGLRenderer.cxx<br /> #* Include scalablesdk_wrapper.H<br /> #* Add a call to ScalableSDKWrapper::doWarpBlendStereoTile() before glXSwapBuffers(this-&gt;DisplayId, this-&gt;WindowId) on line 444<br /> # edit $G/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx<br /> #* <br /> # edit $G/VTK/Rendering/OpenGL/vtkOpenGLRenderer.h<br /> #* <br /> # edit $G/VTK/Rendering/OpenGL/vtkOpenGLRenderWindow.h<br /> #* <br /> # edit $G/VTK/Rendering/OpenGL/vtkOpenGLRenderWindow.cxx<br /> #* <br /> # edit $G/VTK/Rendering/Core/vtkCamera.cxx<br /> #* For the asymmetric frustum look at the method vtkCamera::ComputeOffAxisProjectionFrustum</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Integrating_Scalable_with_ParaView&diff=6394 2013-08-12T21:24:48Z

<p>Wesley Miller: </p> <hr /> <div># Define your ParaView source directory as $G<br /> # edit $G/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx<br /> #* <br /> # edit $G/VTK/Rendering/OpenGL/vtkOpenGLRenderer.h<br /> #* <br /> # edit $G/VTK/Rendering/OpenGL/vtkOpenGLRenderWindow.h<br /> #* <br /> # edit $G/VTK/Rendering/OpenGL/vtkOpenGLRenderWindow.cxx<br /> #* <br /> # edit $G/VTK/Rendering/Core/vtkCamera.cxx<br /> #* For the asymmetric frustum look at the method vtkCamera::ComputeOffAxisProjectionFrustum</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Integrating_Scalable_with_ParaView&diff=6393 2013-08-12T21:24:25Z

<p>Wesley Miller: </p> <hr /> <div># Define your ParaView source directory as $G<br /> # edit $G/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx<br /> #* <br /> # edit $G/VTK/Rendering/OpenGL/vtkOpenGLRenderer.h<br /> #* <br /> # edit $G/VTK/Rendering/OpenGL/vtkOpenGLRenderWindow.h<br /> #* <br /> # edit $G/VTK/Rendering/OpenGL/vtkOpenGLRenderWindow.cxx<br /> #* <br /> # edit $G/VTK/Rendering/Core/vtkCamera.cxx<br /> #* Look at the method vtkCamera::ComputeOffAxisProjectionFrustum</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Integrating_Scalable_with_ParaView&diff=6392 2013-08-12T21:23:09Z

<p>Wesley Miller: Created page with &quot;# Define your ParaView source directory as $G # edit $G/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx #* # edit $G/VTK/Rendering/OpenGL/vtkOpenGLRenderer.h #* # edit $G/VTK/Ren...&quot;</p> <hr /> <div># Define your ParaView source directory as $G<br /> # edit $G/VTK/Rendering/OpenGL/vtkOpenGLRenderer.cxx<br /> #* <br /> # edit $G/VTK/Rendering/OpenGL/vtkOpenGLRenderer.h<br /> #* <br /> # edit $G/VTK/Rendering/OpenGL/vtkOpenGLRenderWindow.h<br /> #* <br /> # edit $G/VTK/Rendering/OpenGL/vtkOpenGLRenderWindow.cxx<br /> #* <br /> # edit $G/VTK/Rendering/Core/vtkCamera.cxx<br /> #*</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Plans_and_Goals&diff=6391 2013-08-06T15:20:23Z

<p>Wesley Miller: /* Wesley */</p> <hr /> <div>On this page the members of the [[VRL]] record and refine their goals for the current semester. This is a living document in which [[dhl]] will provide feedback. See the bottom of the page for links to past plans &amp; goals documents.<br /> <br /> == Current Schedule ==<br /> Meetings are on Mondays. The authoritative list is in dhl's calendar.<br /> <br /> == Current Plans and Goals (Summer '13) ==<br /> <br /> === [[User:Connor Gramazio|Connor]] ===<br /> Goals<br /> * Submit VIS poster using 237 data<br /> * Run paper prototype study<br /> * Implement client/server cancer analysis tool capable of serving dynamic views<br /> * Carry MTurk experiment from perception class as far as deemed fit<br /> * Help IVRG MTurk project wrap up<br /> <br /> Important dates:<br /> * June 13-25: San Francisco; working ~9-5 M-F with e-mail access<br /> * June 27: Poster deadline<br /> * July 13-August 5: Ghana (Volta Region, Accra, Cape Coast); limited to no e-mail access<br /> <br /> === [[User:David Laidlaw|David]] ===<br /> <br /> * get Jadrian graduated<br /> * Cave operational by end of summer<br /> ** at least front wall, with blending and Cave Painting<br /> * excellent cs237<br /> * prep for cool, new(ish?) cs16 for Spring<br /> * December Expeditions in Computing submission<br /> * volume rendering interaction in WristVis<br /> * brain metrics papers out with Ryan<br /> * longer-term funding matched with group<br /> <br /> === [[User:Anne Kenyon|Anne]] ===<br /> Goals<br /> * Continue construction of the new Cave as parts arrive<br /> * Complete 1-3 demos for the Cave (not from scratch - adapting code from other sources)<br /> ** some of: Tom Banchoff, Mandelbox Fractal, Music Visualizer<br /> ** Have running in the Cave by the end of the summer<br /> * Work on one long-term Cave project of use to scientists<br /> ** understand the science behind the simulation or tool<br /> ** develop and maintain a good relationship with scientists to encourage further productive use of the Cave.<br /> * Prepare for GREs, take in August.<br /> <br /> === [[User:Steven McGarty| Steven]] ===<br /> Goals<br /> * Maintain CMCOA pipeline<br /> ** Fix SIGUSR1 issue and asssociated radius registration issues<br /> ** Provide troubleshooting and fix bugs if they arise - including the recent problems with the linux upgrade<br /> * Install levmar and use to replace NAG library calls within CMCOA pipeline<br /> * Work at making CIT-side portion of pipeline more user-friendly so that it is accessible to people without linux and programming experience<br /> * Assist with construction of Cave <br /> &lt;!-- please don't edit below this line --&gt;<br /> <br /> <br /> <br /> === [[User:Wesley Miller|Wesley]] ===<br /> <br /> *Finish new CAVE construction<br /> *Get ParaView working on both the new CAVE and the old one<br /> *Get CavePainting (and other VRG3D applications by extension) working on both the new CAVE and the old one<br /> *Speak with faculty interested in working with the CAVE and compile a list of interests<br /> *Work with different VR frameworks and get them running in the CAVE<br /> <br /> &lt;!-- please don't edit below this line --&gt;<br /> <br /> <br /> ----<br /> <br /> == Past Plans and Goals ==<br /> * [[/Spring 2013|Spring '13]]<br /> * [[/Fall 2012|Fall '12]]<br /> * [[/Summer 2012|Summer '12]]<br /> * [[/Spring 2012|Spring '12]]<br /> * [[/Summer-Fall 2011|Summer-Fall '11]]<br /> * [[/Spring 2011|Spring '11]]<br /> * [[/Summer-Fall 2010|Summer-Fall '10]]<br /> * [[/Spring 2010|Spring '10]]<br /> * [[/Fall 2009|Fall '09]]<br /> * [[/Summer 2009|Summer '09]]<br /> * [[/Spring 2009|Spring '09]]<br /> * [[/Fall 2008|Fall '08]]<br /> * [http://sites.google.com/a/vis.cs.brown.edu/collaboravis/Home/summer-08-group-goals Summer '08]<br /> <br /> [[Category:VRL]]</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Building_CavePainting&diff=6390 2013-08-05T14:16:55Z

<p>Wesley Miller: /* Installing CavePainting */</p> <hr /> <div>Currently, this has only been tested and shown to work on the CCV test curved wall at 94 Waterman.<br /> <br /> == Setting Up and Checking Everything Out ==<br /> <br /> #cd $G<br /> #*Before performing this step define $G as your sandbox directory and define CVSROOT as your username@ssh.cs.brown.edu:/research/graphics/cvsroot/<br /> #**An example can be found at [[Set_up_your_environment_for_diffusion_MRI_processing#Set_up_your_environment]]<br /> #**The file which you must edit may vary on different operating systems<br /> #cvs co common<br /> #cvs co project<br /> #cvs co import<br /> #mkdir install_linux<br /> #cd $G/import<br /> #svn co https://vrg3d.svn.sourceforge.net/svnroot/vrg3d vrg3d<br /> <br /> == Installing [[VRPN]] ==<br /> <br /> #cd $G/import/vrpn/kit<br /> #unzip vrpn_07_26.zip<br /> #cd $G/import/vrpn/kit/quat<br /> #make<br /> #*Before performing this step<br /> #**Edit the Makefile<br /> #***Uncomment the line corresponding to your machine's architecture<br /> #***Change INSTALL_DIR on line 31 from /usr/local to $G/install_linux<br /> #make install<br /> #cd $G/import/vrpn/kit/vrpn<br /> #make<br /> #*Before performing this step<br /> #**Edit the Makefile<br /> #***Uncomment the line corresponding to your machine's architecture<br /> #***Change INSTALL_DIR on line 52 from /usr/local to $G/install_linux<br /> #make install<br /> #cd $G/import/vrpn/kit/vrpn/server_src<br /> #make<br /> #*Before performing this step<br /> #**Edit the Makefile<br /> #***Uncomment the line corresponding to your machine's architecture<br /> #***Change INSTALL_DIR on line 29 from /usr/local to $G/install_linux<br /> #make install<br /> <br /> == Installing [[G3D]] ==<br /> <br /> #cd $G/import/g3d/kit<br /> #unzip G3D-8.01-src_cvs.zip<br /> #cd $G/import/g3d/kit/G3D<br /> #./buildg3d &lt;nowiki&gt;--&lt;/nowiki&gt;install update<br /> #*Before performing this step<br /> #**Edit buildg3d<br /> #***Change installDir on line 105 from '/usr/local' to '$G/install_linux'<br /> #****Actually type in the directory path of $G for this<br /> #***Comment out line 362 &quot;&lt;nowiki&gt;if osx or (ice.utils.shell(&quot;locate libzip.a&quot;) == ''):&lt;/nowiki&gt;&quot;<br /> #***Remove one indent from line 363<br /> #*If you encounter an error related to usleep, a discussion of this bug can be found [https://groups.google.com/forum/#!topic/g3d-users/BwslmuzAs44 here]<br /> #./buildg3d &lt;nowiki&gt;--&lt;/nowiki&gt;install lib<br /> <br /> == Configuring [[VRG3D]] ==<br /> [http://vis.cs.brown.edu/resources/doc/VRG3D/index.html VRG3D Documentation]<br /> #cd $G/import/vrg3d/vrg3d<br /> #python configure.py -vrpn $G/install_linux -g3d $G/install_linux -vrg3d $G/install_linux<br /> #*If working on a 64 bit system, edit configure.py and make the following replacements before running this command<br /> #**lib/libSDL to lib64/libSDL<br /> #**lib/libGLU to lib64/libGLU<br /> #***If you're on the Brown CS system, you may have to substitute /lib with /lib/x86_64-linux-gnu<br /> #make allclean<br /> #make all<br /> #make install<br /> <br /> == Installing [[MMotion]] ==<br /> <br /> #cd $G/common/MMotion<br /> #make<br /> #*If you get an error with this command edit the $G/common/build/make/compile.gcc.local.make<br /> #**Comment out $(GCC2_SUFFIX) on lines 50 - 53<br /> #**Comment out $(GCC3_SUFFIX) on lines 64 - 67<br /> #**Comment out $(GCC4_SUFFIX) on lines 90 - 93<br /> #**Comment out $(GCCX_SUFFIX) on lines 104 - 107<br /> #*If the environment variable GARCH is not set, set it, or you will be prompted to do so<br /> #make install<br /> <br /> == Installing Common [[Kuchora]] Packages ==<br /> <br /> #cd $G/common/kuchora<br /> #make<br /> #*Before performing this step the second time<br /> #**Edit $G/common/kuchora/base/KuchoraBaseApp.H and make the following replacements before running this command:<br /> #***&quot;_camera&quot; to &quot;_cameras[0]&quot; on line 42<br /> #make install<br /> <br /> == Installing [[CavePainting]] ==<br /> <br /> #cd $G/project/kuchora/cavepainting<br /> #make<br /> #*If you get an error about missing -lGLG3D<br /> #**Change &quot;$(G_IMPORT)/g3d/g3d_8_$(G_COMPILER)&quot; in $G/common/build/make/g3d.make on line 20 and &quot;$(G_IMPORT)/g3d/g3d_8.01_$(G_COMPILER)_64&quot; on line 17 to &quot;$(G)/install_linux&quot; <br /> #*If you get an error about missing -lvrg3d:<br /> #**Substitute lib64 with lib on line 18 of $G/common/build/make/vrg3d.make. The sed command 's/lib64/lib/g' should fix this.<br /> #make install<br /> <br /> == Allowing [[CavePainting]] to be Executed ==<br /> <br /> #cd $G/project/kuchora/cavepainting<br /> #chmod 775 run<br /> <br /> == Moving Files and Creating Symbolic Links to Work With Directory Structure ==<br /> <br /> #mkdir $G/project/kuchora/apps/<br /> #cd $G/project/kuchora/apps/<br /> #mv $G/project/kuchora/cavepainting/ $G/project/kuchora/apps/cavepainting<br /> #cd $G/project/kuchora/<br /> #ln -s $G/project/kuchora/apps/cavepainting/ cavepainting<br /> #cd $G/project/kuchora/<br /> #ln -s $G/common/kuchora/data/ kdata<br /> #mkdir $G/lib/<br /> #mkdir $G/lib/kuchora/<br /> #cd $G/lib/kuchora/<br /> #ln -s $G/project/kuchora/kdata/images/ images<br /> #cd $G/lib/kuchora/<br /> #ln -s $G/project/kuchora/kdata/fonts/ fonts<br /> <br /> == Running [[CavePainting]] in Desktop Mode ==<br /> <br /> [[Image:Screenshot from 2012-07-10 11_25_58.png|right|thumb|CavePainting Running in Desktop Mode]]<br /> #cd $G/project/kuchora/apps/cavepainting<br /> #./run desktop<br /> <br /> [[Category:CavePainting]][[Category:Software]][[Category:Art and Visualization]][[Category:CavePainting HOWTO]]</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Building_CavePainting&diff=6389 2013-07-31T21:58:47Z

<p>Wesley Miller: /* Installing Common Kuchora Packages */</p> <hr /> <div>Currently, this has only been tested and shown to work on the CCV test curved wall at 94 Waterman.<br /> <br /> == Setting Up and Checking Everything Out ==<br /> <br /> #cd $G<br /> #*Before performing this step define $G as your sandbox directory and define CVSROOT as your username@ssh.cs.brown.edu:/research/graphics/cvsroot/<br /> #**An example can be found at [[Set_up_your_environment_for_diffusion_MRI_processing#Set_up_your_environment]]<br /> #**The file which you must edit may vary on different operating systems<br /> #cvs co common<br /> #cvs co project<br /> #cvs co import<br /> #mkdir install_linux<br /> #cd $G/import<br /> #svn co https://vrg3d.svn.sourceforge.net/svnroot/vrg3d vrg3d<br /> <br /> == Installing [[VRPN]] ==<br /> <br /> #cd $G/import/vrpn/kit<br /> #unzip vrpn_07_26.zip<br /> #cd $G/import/vrpn/kit/quat<br /> #make<br /> #*Before performing this step<br /> #**Edit the Makefile<br /> #***Uncomment the line corresponding to your machine's architecture<br /> #***Change INSTALL_DIR on line 31 from /usr/local to $G/install_linux<br /> #make install<br /> #cd $G/import/vrpn/kit/vrpn<br /> #make<br /> #*Before performing this step<br /> #**Edit the Makefile<br /> #***Uncomment the line corresponding to your machine's architecture<br /> #***Change INSTALL_DIR on line 52 from /usr/local to $G/install_linux<br /> #make install<br /> #cd $G/import/vrpn/kit/vrpn/server_src<br /> #make<br /> #*Before performing this step<br /> #**Edit the Makefile<br /> #***Uncomment the line corresponding to your machine's architecture<br /> #***Change INSTALL_DIR on line 29 from /usr/local to $G/install_linux<br /> #make install<br /> <br /> == Installing [[G3D]] ==<br /> <br /> #cd $G/import/g3d/kit<br /> #unzip G3D-8.01-src_cvs.zip<br /> #cd $G/import/g3d/kit/G3D<br /> #./buildg3d &lt;nowiki&gt;--&lt;/nowiki&gt;install update<br /> #*Before performing this step<br /> #**Edit buildg3d<br /> #***Change installDir on line 105 from '/usr/local' to '$G/install_linux'<br /> #****Actually type in the directory path of $G for this<br /> #***Comment out line 362 &quot;&lt;nowiki&gt;if osx or (ice.utils.shell(&quot;locate libzip.a&quot;) == ''):&lt;/nowiki&gt;&quot;<br /> #***Remove one indent from line 363<br /> #*If you encounter an error related to usleep, a discussion of this bug can be found [https://groups.google.com/forum/#!topic/g3d-users/BwslmuzAs44 here]<br /> #./buildg3d &lt;nowiki&gt;--&lt;/nowiki&gt;install lib<br /> <br /> == Configuring [[VRG3D]] ==<br /> [http://vis.cs.brown.edu/resources/doc/VRG3D/index.html VRG3D Documentation]<br /> #cd $G/import/vrg3d/vrg3d<br /> #python configure.py -vrpn $G/install_linux -g3d $G/install_linux -vrg3d $G/install_linux<br /> #*If working on a 64 bit system, edit configure.py and make the following replacements before running this command<br /> #**lib/libSDL to lib64/libSDL<br /> #**lib/libGLU to lib64/libGLU<br /> #***If you're on the Brown CS system, you may have to substitute /lib with /lib/x86_64-linux-gnu<br /> #make allclean<br /> #make all<br /> #make install<br /> <br /> == Installing [[MMotion]] ==<br /> <br /> #cd $G/common/MMotion<br /> #make<br /> #*If you get an error with this command edit the $G/common/build/make/compile.gcc.local.make<br /> #**Comment out $(GCC2_SUFFIX) on lines 50 - 53<br /> #**Comment out $(GCC3_SUFFIX) on lines 64 - 67<br /> #**Comment out $(GCC4_SUFFIX) on lines 90 - 93<br /> #**Comment out $(GCCX_SUFFIX) on lines 104 - 107<br /> #*If the environment variable GARCH is not set, set it, or you will be prompted to do so<br /> #make install<br /> <br /> == Installing Common [[Kuchora]] Packages ==<br /> <br /> #cd $G/common/kuchora<br /> #make<br /> #*Before performing this step the second time<br /> #**Edit $G/common/kuchora/base/KuchoraBaseApp.H and make the following replacements before running this command:<br /> #***&quot;_camera&quot; to &quot;_cameras[0]&quot; on line 42<br /> #make install<br /> <br /> == Installing [[CavePainting]] ==<br /> <br /> #cd $G/project/kuchora/cavepainting<br /> #make<br /> #*If you get an error about missing -lGLG3D<br /> #**Change &quot;$(G_IMPORT)/g3d/g3d_8_$(G_COMPILER)&quot; in $G/common/build/make/g3d.make on line 20 to &quot;$(G)/install_linux&quot; <br /> #*If you get an error about missing -lvrg3d:<br /> #**Substitute lib64 with lib on line 18 of $G/common/build/make/vrg3d.make. The sed command 's/lib64/lib/g' should fix this.<br /> #make install<br /> <br /> == Allowing [[CavePainting]] to be Executed ==<br /> <br /> #cd $G/project/kuchora/cavepainting<br /> #chmod 775 run<br /> <br /> == Moving Files and Creating Symbolic Links to Work With Directory Structure ==<br /> <br /> #mkdir $G/project/kuchora/apps/<br /> #cd $G/project/kuchora/apps/<br /> #mv $G/project/kuchora/cavepainting/ $G/project/kuchora/apps/cavepainting<br /> #cd $G/project/kuchora/<br /> #ln -s $G/project/kuchora/apps/cavepainting/ cavepainting<br /> #cd $G/project/kuchora/<br /> #ln -s $G/common/kuchora/data/ kdata<br /> #mkdir $G/lib/<br /> #mkdir $G/lib/kuchora/<br /> #cd $G/lib/kuchora/<br /> #ln -s $G/project/kuchora/kdata/images/ images<br /> #cd $G/lib/kuchora/<br /> #ln -s $G/project/kuchora/kdata/fonts/ fonts<br /> <br /> == Running [[CavePainting]] in Desktop Mode ==<br /> <br /> [[Image:Screenshot from 2012-07-10 11_25_58.png|right|thumb|CavePainting Running in Desktop Mode]]<br /> #cd $G/project/kuchora/apps/cavepainting<br /> #./run desktop<br /> <br /> [[Category:CavePainting]][[Category:Software]][[Category:Art and Visualization]][[Category:CavePainting HOWTO]]</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Building_CavePainting&diff=6388 2013-07-31T15:03:35Z

<p>Wesley Miller: /* Installing CavePainting */</p> <hr /> <div>Currently, this has only been tested and shown to work on the CCV test curved wall at 94 Waterman.<br /> <br /> == Setting Up and Checking Everything Out ==<br /> <br /> #cd $G<br /> #*Before performing this step define $G as your sandbox directory and define CVSROOT as your username@ssh.cs.brown.edu:/research/graphics/cvsroot/<br /> #**An example can be found at [[Set_up_your_environment_for_diffusion_MRI_processing#Set_up_your_environment]]<br /> #**The file which you must edit may vary on different operating systems<br /> #cvs co common<br /> #cvs co project<br /> #cvs co import<br /> #mkdir install_linux<br /> #cd $G/import<br /> #svn co https://vrg3d.svn.sourceforge.net/svnroot/vrg3d vrg3d<br /> <br /> == Installing [[VRPN]] ==<br /> <br /> #cd $G/import/vrpn/kit<br /> #unzip vrpn_07_26.zip<br /> #cd $G/import/vrpn/kit/quat<br /> #make<br /> #*Before performing this step<br /> #**Edit the Makefile<br /> #***Uncomment the line corresponding to your machine's architecture<br /> #***Change INSTALL_DIR on line 31 from /usr/local to $G/install_linux<br /> #make install<br /> #cd $G/import/vrpn/kit/vrpn<br /> #make<br /> #*Before performing this step<br /> #**Edit the Makefile<br /> #***Uncomment the line corresponding to your machine's architecture<br /> #***Change INSTALL_DIR on line 52 from /usr/local to $G/install_linux<br /> #make install<br /> #cd $G/import/vrpn/kit/vrpn/server_src<br /> #make<br /> #*Before performing this step<br /> #**Edit the Makefile<br /> #***Uncomment the line corresponding to your machine's architecture<br /> #***Change INSTALL_DIR on line 29 from /usr/local to $G/install_linux<br /> #make install<br /> <br /> == Installing [[G3D]] ==<br /> <br /> #cd $G/import/g3d/kit<br /> #unzip G3D-8.01-src_cvs.zip<br /> #cd $G/import/g3d/kit/G3D<br /> #./buildg3d &lt;nowiki&gt;--&lt;/nowiki&gt;install update<br /> #*Before performing this step<br /> #**Edit buildg3d<br /> #***Change installDir on line 105 from '/usr/local' to '$G/install_linux'<br /> #****Actually type in the directory path of $G for this<br /> #***Comment out line 362 &quot;&lt;nowiki&gt;if osx or (ice.utils.shell(&quot;locate libzip.a&quot;) == ''):&lt;/nowiki&gt;&quot;<br /> #***Remove one indent from line 363<br /> #*If you encounter an error related to usleep, a discussion of this bug can be found [https://groups.google.com/forum/#!topic/g3d-users/BwslmuzAs44 here]<br /> #./buildg3d &lt;nowiki&gt;--&lt;/nowiki&gt;install lib<br /> <br /> == Configuring [[VRG3D]] ==<br /> [http://vis.cs.brown.edu/resources/doc/VRG3D/index.html VRG3D Documentation]<br /> #cd $G/import/vrg3d/vrg3d<br /> #python configure.py -vrpn $G/install_linux -g3d $G/install_linux -vrg3d $G/install_linux<br /> #*If working on a 64 bit system, edit configure.py and make the following replacements before running this command<br /> #**lib/libSDL to lib64/libSDL<br /> #**lib/libGLU to lib64/libGLU<br /> #***If you're on the Brown CS system, you may have to substitute /lib with /lib/x86_64-linux-gnu<br /> #make allclean<br /> #make all<br /> #make install<br /> <br /> == Installing [[MMotion]] ==<br /> <br /> #cd $G/common/MMotion<br /> #make<br /> #*If you get an error with this command edit the $G/common/build/make/compile.gcc.local.make<br /> #**Comment out $(GCC2_SUFFIX) on lines 50 - 53<br /> #**Comment out $(GCC3_SUFFIX) on lines 64 - 67<br /> #**Comment out $(GCC4_SUFFIX) on lines 90 - 93<br /> #**Comment out $(GCCX_SUFFIX) on lines 104 - 107<br /> #*If the environment variable GARCH is not set, set it, or you will be prompted to do so<br /> #make install<br /> <br /> == Installing Common [[Kuchora]] Packages ==<br /> <br /> #cd $G/common/kuchora<br /> #make<br /> #*Before performing this step the second time<br /> #**Edit $G/common/kuchora/base/KuchoraBaseApp.H and make the following replacements before running this command:<br /> #**&quot;_camera&quot; to &quot;_cameras[0]&quot; on line 42<br /> #make install<br /> <br /> == Installing [[CavePainting]] ==<br /> <br /> #cd $G/project/kuchora/cavepainting<br /> #make<br /> #*If you get an error about missing -lGLG3D<br /> #**Change &quot;$(G_IMPORT)/g3d/g3d_8_$(G_COMPILER)&quot; in $G/common/build/make/g3d.make on line 20 to &quot;$(G)/install_linux&quot; <br /> #*If you get an error about missing -lvrg3d:<br /> #**Substitute lib64 with lib on line 18 of $G/common/build/make/vrg3d.make. The sed command 's/lib64/lib/g' should fix this.<br /> #make install<br /> <br /> == Allowing [[CavePainting]] to be Executed ==<br /> <br /> #cd $G/project/kuchora/cavepainting<br /> #chmod 775 run<br /> <br /> == Moving Files and Creating Symbolic Links to Work With Directory Structure ==<br /> <br /> #mkdir $G/project/kuchora/apps/<br /> #cd $G/project/kuchora/apps/<br /> #mv $G/project/kuchora/cavepainting/ $G/project/kuchora/apps/cavepainting<br /> #cd $G/project/kuchora/<br /> #ln -s $G/project/kuchora/apps/cavepainting/ cavepainting<br /> #cd $G/project/kuchora/<br /> #ln -s $G/common/kuchora/data/ kdata<br /> #mkdir $G/lib/<br /> #mkdir $G/lib/kuchora/<br /> #cd $G/lib/kuchora/<br /> #ln -s $G/project/kuchora/kdata/images/ images<br /> #cd $G/lib/kuchora/<br /> #ln -s $G/project/kuchora/kdata/fonts/ fonts<br /> <br /> == Running [[CavePainting]] in Desktop Mode ==<br /> <br /> [[Image:Screenshot from 2012-07-10 11_25_58.png|right|thumb|CavePainting Running in Desktop Mode]]<br /> #cd $G/project/kuchora/apps/cavepainting<br /> #./run desktop<br /> <br /> [[Category:CavePainting]][[Category:Software]][[Category:Art and Visualization]][[Category:CavePainting HOWTO]]</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Building_CavePainting&diff=6387 2013-07-31T15:03:19Z

<p>Wesley Miller: /* Installing CavePainting */</p> <hr /> <div>Currently, this has only been tested and shown to work on the CCV test curved wall at 94 Waterman.<br /> <br /> == Setting Up and Checking Everything Out ==<br /> <br /> #cd $G<br /> #*Before performing this step define $G as your sandbox directory and define CVSROOT as your username@ssh.cs.brown.edu:/research/graphics/cvsroot/<br /> #**An example can be found at [[Set_up_your_environment_for_diffusion_MRI_processing#Set_up_your_environment]]<br /> #**The file which you must edit may vary on different operating systems<br /> #cvs co common<br /> #cvs co project<br /> #cvs co import<br /> #mkdir install_linux<br /> #cd $G/import<br /> #svn co https://vrg3d.svn.sourceforge.net/svnroot/vrg3d vrg3d<br /> <br /> == Installing [[VRPN]] ==<br /> <br /> #cd $G/import/vrpn/kit<br /> #unzip vrpn_07_26.zip<br /> #cd $G/import/vrpn/kit/quat<br /> #make<br /> #*Before performing this step<br /> #**Edit the Makefile<br /> #***Uncomment the line corresponding to your machine's architecture<br /> #***Change INSTALL_DIR on line 31 from /usr/local to $G/install_linux<br /> #make install<br /> #cd $G/import/vrpn/kit/vrpn<br /> #make<br /> #*Before performing this step<br /> #**Edit the Makefile<br /> #***Uncomment the line corresponding to your machine's architecture<br /> #***Change INSTALL_DIR on line 52 from /usr/local to $G/install_linux<br /> #make install<br /> #cd $G/import/vrpn/kit/vrpn/server_src<br /> #make<br /> #*Before performing this step<br /> #**Edit the Makefile<br /> #***Uncomment the line corresponding to your machine's architecture<br /> #***Change INSTALL_DIR on line 29 from /usr/local to $G/install_linux<br /> #make install<br /> <br /> == Installing [[G3D]] ==<br /> <br /> #cd $G/import/g3d/kit<br /> #unzip G3D-8.01-src_cvs.zip<br /> #cd $G/import/g3d/kit/G3D<br /> #./buildg3d &lt;nowiki&gt;--&lt;/nowiki&gt;install update<br /> #*Before performing this step<br /> #**Edit buildg3d<br /> #***Change installDir on line 105 from '/usr/local' to '$G/install_linux'<br /> #****Actually type in the directory path of $G for this<br /> #***Comment out line 362 &quot;&lt;nowiki&gt;if osx or (ice.utils.shell(&quot;locate libzip.a&quot;) == ''):&lt;/nowiki&gt;&quot;<br /> #***Remove one indent from line 363<br /> #*If you encounter an error related to usleep, a discussion of this bug can be found [https://groups.google.com/forum/#!topic/g3d-users/BwslmuzAs44 here]<br /> #./buildg3d &lt;nowiki&gt;--&lt;/nowiki&gt;install lib<br /> <br /> == Configuring [[VRG3D]] ==<br /> [http://vis.cs.brown.edu/resources/doc/VRG3D/index.html VRG3D Documentation]<br /> #cd $G/import/vrg3d/vrg3d<br /> #python configure.py -vrpn $G/install_linux -g3d $G/install_linux -vrg3d $G/install_linux<br /> #*If working on a 64 bit system, edit configure.py and make the following replacements before running this command<br /> #**lib/libSDL to lib64/libSDL<br /> #**lib/libGLU to lib64/libGLU<br /> #***If you're on the Brown CS system, you may have to substitute /lib with /lib/x86_64-linux-gnu<br /> #make allclean<br /> #make all<br /> #make install<br /> <br /> == Installing [[MMotion]] ==<br /> <br /> #cd $G/common/MMotion<br /> #make<br /> #*If you get an error with this command edit the $G/common/build/make/compile.gcc.local.make<br /> #**Comment out $(GCC2_SUFFIX) on lines 50 - 53<br /> #**Comment out $(GCC3_SUFFIX) on lines 64 - 67<br /> #**Comment out $(GCC4_SUFFIX) on lines 90 - 93<br /> #**Comment out $(GCCX_SUFFIX) on lines 104 - 107<br /> #*If the environment variable GARCH is not set, set it, or you will be prompted to do so<br /> #make install<br /> <br /> == Installing Common [[Kuchora]] Packages ==<br /> <br /> #cd $G/common/kuchora<br /> #make<br /> #*Before performing this step the second time<br /> #**Edit $G/common/kuchora/base/KuchoraBaseApp.H and make the following replacements before running this command:<br /> #**&quot;_camera&quot; to &quot;_cameras[0]&quot; on line 42<br /> #make install<br /> <br /> == Installing [[CavePainting]] ==<br /> <br /> #cd $G/project/kuchora/cavepainting<br /> #make<br /> #*If you get an error about -lGLG3D<br /> #**Change &quot;$(G_IMPORT)/g3d/g3d_8_$(G_COMPILER)&quot; in $G/common/build/make/g3d.make on line 20 to &quot;$(G)/install_linux&quot; <br /> #*If you get an error about missing -lvrg3d:<br /> #**Substitute lib64 with lib on line 18 of $G/common/build/make/vrg3d.make. The sed command 's/lib64/lib/g' should fix this.<br /> #make install<br /> <br /> == Allowing [[CavePainting]] to be Executed ==<br /> <br /> #cd $G/project/kuchora/cavepainting<br /> #chmod 775 run<br /> <br /> == Moving Files and Creating Symbolic Links to Work With Directory Structure ==<br /> <br /> #mkdir $G/project/kuchora/apps/<br /> #cd $G/project/kuchora/apps/<br /> #mv $G/project/kuchora/cavepainting/ $G/project/kuchora/apps/cavepainting<br /> #cd $G/project/kuchora/<br /> #ln -s $G/project/kuchora/apps/cavepainting/ cavepainting<br /> #cd $G/project/kuchora/<br /> #ln -s $G/common/kuchora/data/ kdata<br /> #mkdir $G/lib/<br /> #mkdir $G/lib/kuchora/<br /> #cd $G/lib/kuchora/<br /> #ln -s $G/project/kuchora/kdata/images/ images<br /> #cd $G/lib/kuchora/<br /> #ln -s $G/project/kuchora/kdata/fonts/ fonts<br /> <br /> == Running [[CavePainting]] in Desktop Mode ==<br /> <br /> [[Image:Screenshot from 2012-07-10 11_25_58.png|right|thumb|CavePainting Running in Desktop Mode]]<br /> #cd $G/project/kuchora/apps/cavepainting<br /> #./run desktop<br /> <br /> [[Category:CavePainting]][[Category:Software]][[Category:Art and Visualization]][[Category:CavePainting HOWTO]]</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Building_ParaView&diff=6386 2013-07-30T22:51:58Z

<p>Wesley Miller: /* Building ParaView */</p> <hr /> <div>Currently, this has only been tested and shown to work on the CCV test curved wall at 94 Waterman.<br /> <br /> == Setting Up and Checking Everything Out ==<br /> <br /> # cd $G<br /> #* Before performing this step define $G as your sandbox directory<br /> #** An example can be found at [[Set_up_your_environment_for_diffusion_MRI_processing#Set_up_your_environment]]<br /> #** The file which you must edit may vary on different operating systems<br /> #* Visit [http://www.paraview.org/Wiki/ParaView:Build_And_Install the ParaView wiki] to make sure you have all of the prerequisite packages<br /> # git clone git://paraview.org/ParaView.git ParaView<br /> # cd $G/ParaView<br /> # git checkout -b trunk origin/master<br /> # git submodule init<br /> # git submodule update<br /> # mkdir $G/ParaView-bin<br /> <br /> == Building ParaView ==<br /> <br /> # cd $G/ParaView-bin<br /> # ccmake -D MPIEXEC=/usr/lib64/openmpi/bin/mpiexec -D QT_QMAKE_EXECUTABLE=/usr/lib64/qt48/bin/qmake -D PARAVIEW_BUILD_PLUGIN_VRPlugin=ON -D PARAVIEW_USE_MPI=ON -D MPI_C_INCLUDE_PATH=/usr/include/openmpi-x86_64 -D MPI_HEADER_PATH=/usr/include/openmpi-x86_64 -D PARAVIEW_USE_VRPN=ON -D VRPN_INCLUDE_DIR=/share/cave/include/vrpn -D VRPN_LIBRARY=/share/cave/lib/libvrpn.a $G/ParaView<br /> #* configure twice and then generate<br /> # make<br /> # sudo make install<br /> <br /> == Running ParaView ==<br /> <br /> # cd $G/ParaView-bin/bin<br /> # ./paraview</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Building_ParaView&diff=6385 2013-07-30T22:39:24Z

<p>Wesley Miller: /* Building ParaView */</p> <hr /> <div>Currently, this has only been tested and shown to work on the CCV test curved wall at 94 Waterman.<br /> <br /> == Setting Up and Checking Everything Out ==<br /> <br /> # cd $G<br /> #* Before performing this step define $G as your sandbox directory<br /> #** An example can be found at [[Set_up_your_environment_for_diffusion_MRI_processing#Set_up_your_environment]]<br /> #** The file which you must edit may vary on different operating systems<br /> #* Visit [http://www.paraview.org/Wiki/ParaView:Build_And_Install the ParaView wiki] to make sure you have all of the prerequisite packages<br /> # git clone git://paraview.org/ParaView.git ParaView<br /> # cd $G/ParaView<br /> # git checkout -b trunk origin/master<br /> # git submodule init<br /> # git submodule update<br /> # mkdir $G/ParaView-bin<br /> <br /> == Building ParaView ==<br /> <br /> # cd $G/ParaView-bin<br /> # ccmake -D MPIEXEC=/usr/lib64/openmpi/bin/mpiexec -D QT_QMAKE_EXECUTABLE=/usr/lib64/qt48/bin/qmake -D PARAVIEW_BUILD_PLUGIN_VRPlugin=ON -D PARAVIEW_USE_MPI=ON -D MPI_C_INCLUDE_PATH=/usr/include/openmpi-x86_64 -D MPI_HEADER_PATH=/usr/include/openmpi-x86_64 -D PARAVIEW_USE_VRPN=ON -D VRPN_INCLUDE_DIR=/share/cave/include/vrpn -D VRPN_LIBRARY=/share/cave/lib/libvrpn.a $G/ParaView<br /> #* configure and then generate<br /> # make<br /> # sudo make install<br /> <br /> == Running ParaView ==<br /> <br /> # cd $G/ParaView-bin/bin<br /> # ./paraview</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Building_ParaView&diff=6384 2013-07-30T22:19:33Z

<p>Wesley Miller: /* Building ParaView */</p> <hr /> <div>Currently, this has only been tested and shown to work on the CCV test curved wall at 94 Waterman.<br /> <br /> == Setting Up and Checking Everything Out ==<br /> <br /> # cd $G<br /> #* Before performing this step define $G as your sandbox directory<br /> #** An example can be found at [[Set_up_your_environment_for_diffusion_MRI_processing#Set_up_your_environment]]<br /> #** The file which you must edit may vary on different operating systems<br /> #* Visit [http://www.paraview.org/Wiki/ParaView:Build_And_Install the ParaView wiki] to make sure you have all of the prerequisite packages<br /> # git clone git://paraview.org/ParaView.git ParaView<br /> # cd $G/ParaView<br /> # git checkout -b trunk origin/master<br /> # git submodule init<br /> # git submodule update<br /> # mkdir $G/ParaView-bin<br /> <br /> == Building ParaView ==<br /> <br /> # cd $G/ParaView-bin<br /> # ccmake -D MPIEXEC=/usr/lib64/openmpi/bin/mpiexec -D QT_QMAKE_EXECUTABLE=/usr/lib64/qt48/bin/qmake -D PARAVIEW_BUILD_PLUGIN_VRPlugin=ON -D PARAVIEW_USE_MPI=ON -D MPI_C_INCLUDE_PATH=/usr/include/openmpi-x86_64 -D MPI_HEADER_PATH=/usr/include/openmpi-x86_64 -d PARAVIEW_USE_VRPN=ON -D VRPN_INCLUDE_DIR=/share/cave/include/vrpn -D VRPN_LIBRARY=/share/cave/lib/libvrpn.a $G/ParaView<br /> #* configure and then generate<br /> # make<br /> # sudo make install<br /> <br /> == Running ParaView ==<br /> <br /> # cd $G/ParaView-bin/bin<br /> # ./paraview</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Building_ParaView&diff=6383 2013-07-30T21:48:53Z

<p>Wesley Miller: /* Building ParaView */</p> <hr /> <div>Currently, this has only been tested and shown to work on the CCV test curved wall at 94 Waterman.<br /> <br /> == Setting Up and Checking Everything Out ==<br /> <br /> # cd $G<br /> #* Before performing this step define $G as your sandbox directory<br /> #** An example can be found at [[Set_up_your_environment_for_diffusion_MRI_processing#Set_up_your_environment]]<br /> #** The file which you must edit may vary on different operating systems<br /> #* Visit [http://www.paraview.org/Wiki/ParaView:Build_And_Install the ParaView wiki] to make sure you have all of the prerequisite packages<br /> # git clone git://paraview.org/ParaView.git ParaView<br /> # cd $G/ParaView<br /> # git checkout -b trunk origin/master<br /> # git submodule init<br /> # git submodule update<br /> # mkdir $G/ParaView-bin<br /> <br /> == Building ParaView ==<br /> <br /> # cd $G/ParaView-bin<br /> # ccmake -D MPIEXEC=/usr/lib64/openmpi/bin/mpiexec -D QT_QMAKE_EXECUTABLE=/usr/lib64/qt48/bin/qmake -D PARAVIEW_BUILD_PLUGIN_VRPlugin=ON -D PARAVIEW_USE_MPI=ON -D MPI_C_INCLUDE_PATH=/usr/include/openmpi-x86_64 -D MPI_HEADER_PATH=/usr/include/openmpi-x86_64 -d PARAVIEW_USE_VRPN=ON -D VRPN_INCLUDE_DIR=/share/cave/include/vrpn -D VRPN_LIBRARY=/share/cave/lib/libvrpn.a -D $G/ParaView<br /> #* configure and then generate<br /> # make<br /> # sudo make install<br /> <br /> == Running ParaView ==<br /> <br /> # cd $G/ParaView-bin/bin<br /> # ./paraview</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Building_ParaView&diff=6382 2013-07-30T20:52:21Z

<p>Wesley Miller: /* Building ParaView */</p> <hr /> <div>Currently, this has only been tested and shown to work on the CCV test curved wall at 94 Waterman.<br /> <br /> == Setting Up and Checking Everything Out ==<br /> <br /> # cd $G<br /> #* Before performing this step define $G as your sandbox directory<br /> #** An example can be found at [[Set_up_your_environment_for_diffusion_MRI_processing#Set_up_your_environment]]<br /> #** The file which you must edit may vary on different operating systems<br /> #* Visit [http://www.paraview.org/Wiki/ParaView:Build_And_Install the ParaView wiki] to make sure you have all of the prerequisite packages<br /> # git clone git://paraview.org/ParaView.git ParaView<br /> # cd $G/ParaView<br /> # git checkout -b trunk origin/master<br /> # git submodule init<br /> # git submodule update<br /> # mkdir $G/ParaView-bin<br /> <br /> == Building ParaView ==<br /> <br /> # cd $G/ParaView-bin<br /> # ccmake -D MPIEXEC=/usr/lib64/openmpi/bin/mpiexec -D QT_QMAKE_EXECUTABLE=/usr/lib64/qt48/bin/qmake -D PARAVIEW_BUILD_PLUGIN_VRPlugin=ON -D PARAVIEW_USE_MPI=ON -D MPI_C_INCLUDE_PATH=/usr/include/openmpi-x86_64 -D MPI_HEADER_PATH=/usr/include/openmpi-x86_64 -d PARAVIEW_USE_VRPN=ON -D VRPN_INCLUDE_DIR=/share/cave/include/vrpn -D VRPN_LIBRARY=/share/cave/lib/libvrpn.a -D PARAVIEW_DATA_ROOT=$G/ParaView<br /> #* configure and then generate<br /> # make<br /> # sudo make install<br /> <br /> == Running ParaView ==<br /> <br /> # cd $G/ParaView-bin/bin<br /> # ./paraview</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Building_ParaView&diff=6381 2013-07-30T20:50:44Z

<p>Wesley Miller: /* Building ParaView */</p> <hr /> <div>Currently, this has only been tested and shown to work on the CCV test curved wall at 94 Waterman.<br /> <br /> == Setting Up and Checking Everything Out ==<br /> <br /> # cd $G<br /> #* Before performing this step define $G as your sandbox directory<br /> #** An example can be found at [[Set_up_your_environment_for_diffusion_MRI_processing#Set_up_your_environment]]<br /> #** The file which you must edit may vary on different operating systems<br /> #* Visit [http://www.paraview.org/Wiki/ParaView:Build_And_Install the ParaView wiki] to make sure you have all of the prerequisite packages<br /> # git clone git://paraview.org/ParaView.git ParaView<br /> # cd $G/ParaView<br /> # git checkout -b trunk origin/master<br /> # git submodule init<br /> # git submodule update<br /> # mkdir $G/ParaView-bin<br /> <br /> == Building ParaView ==<br /> <br /> # cd $G/ParaView-bin<br /> # ccmake $G/ParaView -D MPIEXEC=/usr/lib64/openmpi/bin/mpiexec -D QT_QMAKE_EXECUTABLE=/usr/lib64/qt48/bin/qmake -D PARAVIEW_BUILD_PLUGIN_VRPlugin=ON -D PARAVIEW_USE_MPI=ON -D MPI_C_INCLUDE_PATH=/usr/include/openmpi-x86_64 -D MPI_HEADER_PATH=/usr/include/openmpi-x86_64 -d PARAVIEW_USE_VRPN=ON -D VRPN_INCLUDE_DIR=/share/cave/include/vrpn -D VRPN_LIBRARY=/share/cave/lib/libvrpn.a<br /> #* configure and then generate<br /> # make<br /> # sudo make install<br /> <br /> == Running ParaView ==<br /> <br /> # cd $G/ParaView-bin/bin<br /> # ./paraview</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Building_ParaView&diff=6380 2013-07-30T20:31:08Z

<p>Wesley Miller: /* Building ParaView */</p> <hr /> <div>Currently, this has only been tested and shown to work on the CCV test curved wall at 94 Waterman.<br /> <br /> == Setting Up and Checking Everything Out ==<br /> <br /> # cd $G<br /> #* Before performing this step define $G as your sandbox directory<br /> #** An example can be found at [[Set_up_your_environment_for_diffusion_MRI_processing#Set_up_your_environment]]<br /> #** The file which you must edit may vary on different operating systems<br /> #* Visit [http://www.paraview.org/Wiki/ParaView:Build_And_Install the ParaView wiki] to make sure you have all of the prerequisite packages<br /> # git clone git://paraview.org/ParaView.git ParaView<br /> # cd $G/ParaView<br /> # git checkout -b trunk origin/master<br /> # git submodule init<br /> # git submodule update<br /> # mkdir $G/ParaView-bin<br /> <br /> == Building ParaView ==<br /> <br /> # cd $G/ParaView-bin<br /> # ccmake -D MPIEXEC=/usr/lib64/openmpi/bin/mpiexec -D QT_QMAKE_EXECUTABLE=/usr/lib64/qt48/bin/qmake -D PARAVIEW_BUILD_PLUGIN_VRPlugin=ON -D PARAVIEW_USE_MPI=ON -D MPI_C_INCLUDE_PATH=/usr/include/openmpi-x86_64 -D MPI_HEADER_PATH=/usr/include/openmpi-x86_64 -d PARAVIEW_USE_VRPN=ON -D VRPN_INCLUDE_DIR=/share/cave/include/vrpn -D VRPN_LIBRARY=/share/cave/lib/libvrpn.a $G/ParaView<br /> #* configure and then generate<br /> # make<br /> # sudo make install<br /> <br /> == Running ParaView ==<br /> <br /> # cd $G/ParaView-bin/bin<br /> # ./paraview</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Building_ParaView&diff=6379 2013-07-30T19:21:09Z

<p>Wesley Miller: /* Building ParaView */</p> <hr /> <div>Currently, this has only been tested and shown to work on the CCV test curved wall at 94 Waterman.<br /> <br /> == Setting Up and Checking Everything Out ==<br /> <br /> # cd $G<br /> #* Before performing this step define $G as your sandbox directory<br /> #** An example can be found at [[Set_up_your_environment_for_diffusion_MRI_processing#Set_up_your_environment]]<br /> #** The file which you must edit may vary on different operating systems<br /> #* Visit [http://www.paraview.org/Wiki/ParaView:Build_And_Install the ParaView wiki] to make sure you have all of the prerequisite packages<br /> # git clone git://paraview.org/ParaView.git ParaView<br /> # cd $G/ParaView<br /> # git checkout -b trunk origin/master<br /> # git submodule init<br /> # git submodule update<br /> # mkdir $G/ParaView-bin<br /> <br /> == Building ParaView ==<br /> <br /> # cd $G/ParaView-bin<br /> # ccmake -D MPIEXEC=/usr/lib64/openmpi/bin/mpiexec -D QT_QMAKE_EXECUTABLE=/usr/lib64/qt48/bin/qmake -D PARAVIEW_BUILD_PLUGIN_VRPlugin=ON -D PARAVIEW_USE_MPI=ON -D MPI_C_INCLUDE_PATH=/usr/include/openmpi-x86_64 -D MPI_HEADER_PATH=/usr/include/openmpi-x86_64 -d PARAVIEW_USE_VRPN=ON $G/ParaView<br /> #* configure and then generate<br /> # make<br /> # sudo make install<br /> <br /> == Running ParaView ==<br /> <br /> # cd $G/ParaView-bin/bin<br /> # ./paraview</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Building_ParaView&diff=6378 2013-07-30T19:06:27Z

<p>Wesley Miller: /* Building ParaView */</p> <hr /> <div>Currently, this has only been tested and shown to work on the CCV test curved wall at 94 Waterman.<br /> <br /> == Setting Up and Checking Everything Out ==<br /> <br /> # cd $G<br /> #* Before performing this step define $G as your sandbox directory<br /> #** An example can be found at [[Set_up_your_environment_for_diffusion_MRI_processing#Set_up_your_environment]]<br /> #** The file which you must edit may vary on different operating systems<br /> #* Visit [http://www.paraview.org/Wiki/ParaView:Build_And_Install the ParaView wiki] to make sure you have all of the prerequisite packages<br /> # git clone git://paraview.org/ParaView.git ParaView<br /> # cd $G/ParaView<br /> # git checkout -b trunk origin/master<br /> # git submodule init<br /> # git submodule update<br /> # mkdir $G/ParaView-bin<br /> <br /> == Building ParaView ==<br /> <br /> # cd $G/ParaView-bin<br /> # ccmake -D MPIEXEC=/usr/lib64/openmpi/bin/mpiexec -D QT_QMAKE_EXECUTABLE=/usr/lib64/qt48/bin/qmake -D PARAVIEW_BUILD_PLUGIN_VRPlugin=ON -D PARAVIEW_USE_MPI=ON -D MPI_C_INCLUDE_PATH=/usr/include/openmpi-x86_64 -D MPI_HEADER_PATH=/usr/include/openmpi-x86_64 $G/ParaView<br /> #* configure and then generate<br /> # make<br /> # sudo make install<br /> <br /> == Running ParaView ==<br /> <br /> # cd $G/ParaView-bin/bin<br /> # ./paraview</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Building_ParaView&diff=6377 2013-07-30T18:06:59Z

<p>Wesley Miller: /* Building ParaView */</p> <hr /> <div>Currently, this has only been tested and shown to work on the CCV test curved wall at 94 Waterman.<br /> <br /> == Setting Up and Checking Everything Out ==<br /> <br /> # cd $G<br /> #* Before performing this step define $G as your sandbox directory<br /> #** An example can be found at [[Set_up_your_environment_for_diffusion_MRI_processing#Set_up_your_environment]]<br /> #** The file which you must edit may vary on different operating systems<br /> #* Visit [http://www.paraview.org/Wiki/ParaView:Build_And_Install the ParaView wiki] to make sure you have all of the prerequisite packages<br /> # git clone git://paraview.org/ParaView.git ParaView<br /> # cd $G/ParaView<br /> # git checkout -b trunk origin/master<br /> # git submodule init<br /> # git submodule update<br /> # mkdir $G/ParaView-bin<br /> <br /> == Building ParaView ==<br /> <br /> # cd $G/ParaView-bin<br /> # ccmake -D MPIEXEC=/usr/lib64/openmpi/bin/mpiexec -D QT_QMAKE_EXECUTABLE=/usr/lib64/qt48/bin/qmake -D PARAVIEW_BUILD_PLUGIN_VRPlugin=ON -D PARAVIEW_USE_MPI=ON -D MPI_C_INCLUDE_PATH=/usr/include/openmpi-x86_64 $G/ParaView<br /> #* configure and then generate<br /> # make<br /> # sudo make install<br /> <br /> == Running ParaView ==<br /> <br /> # cd $G/ParaView-bin/bin<br /> # ./paraview</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Building_ParaView&diff=6376 2013-07-30T14:41:27Z

<p>Wesley Miller: /* Building ParaView */</p> <hr /> <div>Currently, this has only been tested and shown to work on the CCV test curved wall at 94 Waterman.<br /> <br /> == Setting Up and Checking Everything Out ==<br /> <br /> # cd $G<br /> #* Before performing this step define $G as your sandbox directory<br /> #** An example can be found at [[Set_up_your_environment_for_diffusion_MRI_processing#Set_up_your_environment]]<br /> #** The file which you must edit may vary on different operating systems<br /> #* Visit [http://www.paraview.org/Wiki/ParaView:Build_And_Install the ParaView wiki] to make sure you have all of the prerequisite packages<br /> # git clone git://paraview.org/ParaView.git ParaView<br /> # cd $G/ParaView<br /> # git checkout -b trunk origin/master<br /> # git submodule init<br /> # git submodule update<br /> # mkdir $G/ParaView-bin<br /> <br /> == Building ParaView ==<br /> <br /> # cd $G/ParaView-bin<br /> # ccmake -D MPIEXEC=/usr/lib64/openmpi/bin/mpiexec -D QT_QMAKE_EXECUTABLE=/usr/lib64/qt48/bin/qmake $G/ParaView -D PARAVIEW_BUILD_PLUGIN_VRPlugin=ON -D PARAVIEW_USE_MPI=ON -D MPI_C_INCLUDE_PATH=/usr/include/openmpi-x86_64<br /> #* configure and then generate<br /> # make<br /> # sudo make install<br /> <br /> == Running ParaView ==<br /> <br /> # cd $G/ParaView-bin/bin<br /> # ./paraview</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Building_ParaView&diff=6375 2013-07-29T22:09:47Z

<p>Wesley Miller: /* Building ParaView */</p> <hr /> <div>Currently, this has only been tested and shown to work on the CCV test curved wall at 94 Waterman.<br /> <br /> == Setting Up and Checking Everything Out ==<br /> <br /> # cd $G<br /> #* Before performing this step define $G as your sandbox directory<br /> #** An example can be found at [[Set_up_your_environment_for_diffusion_MRI_processing#Set_up_your_environment]]<br /> #** The file which you must edit may vary on different operating systems<br /> #* Visit [http://www.paraview.org/Wiki/ParaView:Build_And_Install the ParaView wiki] to make sure you have all of the prerequisite packages<br /> # git clone git://paraview.org/ParaView.git ParaView<br /> # cd $G/ParaView<br /> # git checkout -b trunk origin/master<br /> # git submodule init<br /> # git submodule update<br /> # mkdir $G/ParaView-bin<br /> <br /> == Building ParaView ==<br /> <br /> # cd $G/ParaView-bin<br /> # ccmake -D MPIEXEC=/usr/lib64/openmpi/bin/mpiexec -D QT_QMAKE_EXECUTABLE=/usr/lib64/qt48/bin/qmake $G/ParaView<br /> #* configure<br /> #* set PARAVIEW_BUILD_PLUGIN_VRPlugin and PARAVIEW_USE_MPI to ON<br /> #* configure<br /> #* set MPI_C_INCLUDE_PATH to /usr/include/openmpi-x86_64<br /> #* configure and then generate<br /> # make<br /> # sudo make install<br /> <br /> == Running ParaView ==<br /> <br /> # cd $G/ParaView-bin/bin<br /> # ./paraview</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Building_CavePainting&diff=6374 2013-07-24T22:37:38Z

<p>Wesley Miller: /* Installing Common Kuchora Packages */</p> <hr /> <div>Currently, this has only been tested and shown to work on the CCV test curved wall at 94 Waterman.<br /> <br /> == Setting Up and Checking Everything Out ==<br /> <br /> #cd $G<br /> #*Before performing this step define $G as your sandbox directory and define CVSROOT as your username@ssh.cs.brown.edu:/research/graphics/cvsroot/<br /> #**An example can be found at [[Set_up_your_environment_for_diffusion_MRI_processing#Set_up_your_environment]]<br /> #**The file which you must edit may vary on different operating systems<br /> #cvs co common<br /> #cvs co project<br /> #cvs co import<br /> #mkdir install_linux<br /> #cd $G/import<br /> #svn co https://vrg3d.svn.sourceforge.net/svnroot/vrg3d vrg3d<br /> <br /> == Installing [[VRPN]] ==<br /> <br /> #cd $G/import/vrpn/kit<br /> #unzip vrpn_07_26.zip<br /> #cd $G/import/vrpn/kit/quat<br /> #make<br /> #*Before performing this step<br /> #**Edit the Makefile<br /> #***Uncomment the line corresponding to your machine's architecture<br /> #***Change INSTALL_DIR on line 31 from /usr/local to $G/install_linux<br /> #make install<br /> #cd $G/import/vrpn/kit/vrpn<br /> #make<br /> #*Before performing this step<br /> #**Edit the Makefile<br /> #***Uncomment the line corresponding to your machine's architecture<br /> #***Change INSTALL_DIR on line 52 from /usr/local to $G/install_linux<br /> #make install<br /> #cd $G/import/vrpn/kit/vrpn/server_src<br /> #make<br /> #*Before performing this step<br /> #**Edit the Makefile<br /> #***Uncomment the line corresponding to your machine's architecture<br /> #***Change INSTALL_DIR on line 29 from /usr/local to $G/install_linux<br /> #make install<br /> <br /> == Installing [[G3D]] ==<br /> <br /> #cd $G/import/g3d/kit<br /> #unzip G3D-8.01-src_cvs.zip<br /> #cd $G/import/g3d/kit/G3D<br /> #./buildg3d &lt;nowiki&gt;--&lt;/nowiki&gt;install update<br /> #*Before performing this step<br /> #**Edit buildg3d<br /> #***Change installDir on line 105 from '/usr/local' to '$G/install_linux'<br /> #****Actually type in the directory path of $G for this<br /> #***Comment out line 362 &quot;&lt;nowiki&gt;if osx or (ice.utils.shell(&quot;locate libzip.a&quot;) == ''):&lt;/nowiki&gt;&quot;<br /> #***Remove one indent from line 363<br /> #*If you encounter an error related to usleep, a discussion of this bug can be found [https://groups.google.com/forum/#!topic/g3d-users/BwslmuzAs44 here]<br /> #./buildg3d &lt;nowiki&gt;--&lt;/nowiki&gt;install lib<br /> <br /> == Configuring [[VRG3D]] ==<br /> [http://vis.cs.brown.edu/resources/doc/VRG3D/index.html VRG3D Documentation]<br /> #cd $G/import/vrg3d/vrg3d<br /> #python configure.py -vrpn $G/install_linux -g3d $G/install_linux -vrg3d $G/install_linux<br /> #*If working on a 64 bit system, edit configure.py and make the following replacements before running this command<br /> #**lib/libSDL to lib64/libSDL<br /> #**lib/libGLU to lib64/libGLU<br /> #***If you're on the Brown CS system, you may have to substitute /lib with /lib/x86_64-linux-gnu<br /> #make allclean<br /> #make all<br /> #make install<br /> <br /> == Installing [[MMotion]] ==<br /> <br /> #cd $G/common/MMotion<br /> #make<br /> #*If you get an error with this command edit the $G/common/build/make/compile.gcc.local.make<br /> #**Comment out $(GCC2_SUFFIX) on lines 50 - 53<br /> #**Comment out $(GCC3_SUFFIX) on lines 64 - 67<br /> #**Comment out $(GCC4_SUFFIX) on lines 90 - 93<br /> #**Comment out $(GCCX_SUFFIX) on lines 104 - 107<br /> #*If the environment variable GARCH is not set, set it, or you will be prompted to do so<br /> #make install<br /> <br /> == Installing Common [[Kuchora]] Packages ==<br /> <br /> #cd $G/common/kuchora<br /> #make<br /> #*Before performing this step the second time<br /> #**Edit $G/common/kuchora/base/KuchoraBaseApp.H and make the following replacements before running this command:<br /> #**&quot;_camera&quot; to &quot;_cameras[0]&quot; on line 42<br /> #make install<br /> <br /> == Installing [[CavePainting]] ==<br /> <br /> #cd $G/project/kuchora/cavepainting<br /> #make<br /> #*If you get an error<br /> #**Change &quot;$(G_IMPORT)/g3d/g3d_8_$(G_COMPILER)&quot; in $G/common/build/make/g3d.make on line 20 to &quot;$(G)/install_linux&quot; <br /> #*If you get an error about missing -lvrg3d:<br /> #**Substitute lib64 with lib on line 18 of $G/common/build/make/vrg3d.make. The sed command 's/lib64/lib/g' should fix this.<br /> #make install<br /> <br /> == Allowing [[CavePainting]] to be Executed ==<br /> <br /> #cd $G/project/kuchora/cavepainting<br /> #chmod 775 run<br /> <br /> == Moving Files and Creating Symbolic Links to Work With Directory Structure ==<br /> <br /> #mkdir $G/project/kuchora/apps/<br /> #cd $G/project/kuchora/apps/<br /> #mv $G/project/kuchora/cavepainting/ $G/project/kuchora/apps/cavepainting<br /> #cd $G/project/kuchora/<br /> #ln -s $G/project/kuchora/apps/cavepainting/ cavepainting<br /> #cd $G/project/kuchora/<br /> #ln -s $G/common/kuchora/data/ kdata<br /> #mkdir $G/lib/<br /> #mkdir $G/lib/kuchora/<br /> #cd $G/lib/kuchora/<br /> #ln -s $G/project/kuchora/kdata/images/ images<br /> #cd $G/lib/kuchora/<br /> #ln -s $G/project/kuchora/kdata/fonts/ fonts<br /> <br /> == Running [[CavePainting]] in Desktop Mode ==<br /> <br /> [[Image:Screenshot from 2012-07-10 11_25_58.png|right|thumb|CavePainting Running in Desktop Mode]]<br /> #cd $G/project/kuchora/apps/cavepainting<br /> #./run desktop<br /> <br /> [[Category:CavePainting]][[Category:Software]][[Category:Art and Visualization]][[Category:CavePainting HOWTO]]</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Building_CavePainting&diff=6373 2013-07-24T21:54:48Z

<p>Wesley Miller: /* Installing VRPN */</p> <hr /> <div>Currently, this has only been tested and shown to work on the CCV test curved wall at 94 Waterman.<br /> <br /> == Setting Up and Checking Everything Out ==<br /> <br /> #cd $G<br /> #*Before performing this step define $G as your sandbox directory and define CVSROOT as your username@ssh.cs.brown.edu:/research/graphics/cvsroot/<br /> #**An example can be found at [[Set_up_your_environment_for_diffusion_MRI_processing#Set_up_your_environment]]<br /> #**The file which you must edit may vary on different operating systems<br /> #cvs co common<br /> #cvs co project<br /> #cvs co import<br /> #mkdir install_linux<br /> #cd $G/import<br /> #svn co https://vrg3d.svn.sourceforge.net/svnroot/vrg3d vrg3d<br /> <br /> == Installing [[VRPN]] ==<br /> <br /> #cd $G/import/vrpn/kit<br /> #unzip vrpn_07_26.zip<br /> #cd $G/import/vrpn/kit/quat<br /> #make<br /> #*Before performing this step<br /> #**Edit the Makefile<br /> #***Uncomment the line corresponding to your machine's architecture<br /> #***Change INSTALL_DIR on line 31 from /usr/local to $G/install_linux<br /> #make install<br /> #cd $G/import/vrpn/kit/vrpn<br /> #make<br /> #*Before performing this step<br /> #**Edit the Makefile<br /> #***Uncomment the line corresponding to your machine's architecture<br /> #***Change INSTALL_DIR on line 52 from /usr/local to $G/install_linux<br /> #make install<br /> #cd $G/import/vrpn/kit/vrpn/server_src<br /> #make<br /> #*Before performing this step<br /> #**Edit the Makefile<br /> #***Uncomment the line corresponding to your machine's architecture<br /> #***Change INSTALL_DIR on line 29 from /usr/local to $G/install_linux<br /> #make install<br /> <br /> == Installing [[G3D]] ==<br /> <br /> #cd $G/import/g3d/kit<br /> #unzip G3D-8.01-src_cvs.zip<br /> #cd $G/import/g3d/kit/G3D<br /> #./buildg3d &lt;nowiki&gt;--&lt;/nowiki&gt;install update<br /> #*Before performing this step<br /> #**Edit buildg3d<br /> #***Change installDir on line 105 from '/usr/local' to '$G/install_linux'<br /> #****Actually type in the directory path of $G for this<br /> #***Comment out line 362 &quot;&lt;nowiki&gt;if osx or (ice.utils.shell(&quot;locate libzip.a&quot;) == ''):&lt;/nowiki&gt;&quot;<br /> #***Remove one indent from line 363<br /> #*If you encounter an error related to usleep, a discussion of this bug can be found [https://groups.google.com/forum/#!topic/g3d-users/BwslmuzAs44 here]<br /> #./buildg3d &lt;nowiki&gt;--&lt;/nowiki&gt;install lib<br /> <br /> == Configuring [[VRG3D]] ==<br /> [http://vis.cs.brown.edu/resources/doc/VRG3D/index.html VRG3D Documentation]<br /> #cd $G/import/vrg3d/vrg3d<br /> #python configure.py -vrpn $G/install_linux -g3d $G/install_linux -vrg3d $G/install_linux<br /> #*If working on a 64 bit system, edit configure.py and make the following replacements before running this command<br /> #**lib/libSDL to lib64/libSDL<br /> #**lib/libGLU to lib64/libGLU<br /> #***If you're on the Brown CS system, you may have to substitute /lib with /lib/x86_64-linux-gnu<br /> #make allclean<br /> #make all<br /> #make install<br /> <br /> == Installing [[MMotion]] ==<br /> <br /> #cd $G/common/MMotion<br /> #make<br /> #*If you get an error with this command edit the $G/common/build/make/compile.gcc.local.make<br /> #**Comment out $(GCC2_SUFFIX) on lines 50 - 53<br /> #**Comment out $(GCC3_SUFFIX) on lines 64 - 67<br /> #**Comment out $(GCC4_SUFFIX) on lines 90 - 93<br /> #**Comment out $(GCCX_SUFFIX) on lines 104 - 107<br /> #*If the environment variable GARCH is not set, set it, or you will be prompted to do so<br /> #make install<br /> <br /> == Installing Common [[Kuchora]] Packages ==<br /> <br /> #cd $G/common/kuchora<br /> #make<br /> #*You will get an error performing this step the first time, but it is required<br /> #*Before performing this step the second time<br /> #**Edit $G/common/kuchora/include/kuchora/KuchoraBaseApp.H and make the following replacements before running this command<br /> #**_camera to _cameras[0]<br /> #make install<br /> <br /> == Installing [[CavePainting]] ==<br /> <br /> #cd $G/project/kuchora/cavepainting<br /> #make<br /> #*If you get an error<br /> #**Change &quot;$(G_IMPORT)/g3d/g3d_8_$(G_COMPILER)&quot; in $G/common/build/make/g3d.make on line 20 to &quot;$(G)/install_linux&quot; <br /> #*If you get an error about missing -lvrg3d:<br /> #**Substitute lib64 with lib on line 18 of $G/common/build/make/vrg3d.make. The sed command 's/lib64/lib/g' should fix this.<br /> #make install<br /> <br /> == Allowing [[CavePainting]] to be Executed ==<br /> <br /> #cd $G/project/kuchora/cavepainting<br /> #chmod 775 run<br /> <br /> == Moving Files and Creating Symbolic Links to Work With Directory Structure ==<br /> <br /> #mkdir $G/project/kuchora/apps/<br /> #cd $G/project/kuchora/apps/<br /> #mv $G/project/kuchora/cavepainting/ $G/project/kuchora/apps/cavepainting<br /> #cd $G/project/kuchora/<br /> #ln -s $G/project/kuchora/apps/cavepainting/ cavepainting<br /> #cd $G/project/kuchora/<br /> #ln -s $G/common/kuchora/data/ kdata<br /> #mkdir $G/lib/<br /> #mkdir $G/lib/kuchora/<br /> #cd $G/lib/kuchora/<br /> #ln -s $G/project/kuchora/kdata/images/ images<br /> #cd $G/lib/kuchora/<br /> #ln -s $G/project/kuchora/kdata/fonts/ fonts<br /> <br /> == Running [[CavePainting]] in Desktop Mode ==<br /> <br /> [[Image:Screenshot from 2012-07-10 11_25_58.png|right|thumb|CavePainting Running in Desktop Mode]]<br /> #cd $G/project/kuchora/apps/cavepainting<br /> #./run desktop<br /> <br /> [[Category:CavePainting]][[Category:Software]][[Category:Art and Visualization]][[Category:CavePainting HOWTO]]</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Building_CavePainting&diff=6372 2013-07-24T21:45:02Z

<p>Wesley Miller: /* Configuring VRG3D */</p> <hr /> <div>Currently, this has only been tested and shown to work on the CCV test curved wall at 94 Waterman.<br /> <br /> == Setting Up and Checking Everything Out ==<br /> <br /> #cd $G<br /> #*Before performing this step define $G as your sandbox directory and define CVSROOT as your username@ssh.cs.brown.edu:/research/graphics/cvsroot/<br /> #**An example can be found at [[Set_up_your_environment_for_diffusion_MRI_processing#Set_up_your_environment]]<br /> #**The file which you must edit may vary on different operating systems<br /> #cvs co common<br /> #cvs co project<br /> #cvs co import<br /> #mkdir install_linux<br /> #cd $G/import<br /> #svn co https://vrg3d.svn.sourceforge.net/svnroot/vrg3d vrg3d<br /> <br /> == Installing [[VRPN]] ==<br /> <br /> #cd $G/import/vrpn/kit<br /> #unzip vrpn_07_26.zip<br /> #cd $G/import/vrpn/kit/quat<br /> #make<br /> #*Before performing this step<br /> #**Edit the Makefile<br /> #***Uncomment the line corresponding to your machine's architecture<br /> #***Change INSTALL_DIR on line 31 from /usr/local to $G/install_linux<br /> #make install<br /> #cd $G/import/vrpn/kit/vrpn<br /> #make<br /> #*Before performing this step<br /> #**Edit the Makefile<br /> #***Uncomment the line corresponding to your machine's architecture<br /> #***Change INSTALL_DIR on line 52 from /usr/local to $G/install_linux<br /> #make install<br /> #cd $G/import/vrpn/kit/vrpn/server_src<br /> #make<br /> #*Before performing this step<br /> #**Edit the Makefile<br /> #***Uncomment the line corresponding to your machine's architecture<br /> #***Change INSTALL_DIR on line 29 from /usr/local to $G/install_linux<br /> #make install<br /> <br /> Note: The make files are sensitive to existing directories, so if you are installing to a shared directory, you may have to add a mkdir flag to avoid errors. The sed command 's/mkdir/mkdir -p/g' should do the trick.<br /> <br /> == Installing [[G3D]] ==<br /> <br /> #cd $G/import/g3d/kit<br /> #unzip G3D-8.01-src_cvs.zip<br /> #cd $G/import/g3d/kit/G3D<br /> #./buildg3d &lt;nowiki&gt;--&lt;/nowiki&gt;install update<br /> #*Before performing this step<br /> #**Edit buildg3d<br /> #***Change installDir on line 105 from '/usr/local' to '$G/install_linux'<br /> #****Actually type in the directory path of $G for this<br /> #***Comment out line 362 &quot;&lt;nowiki&gt;if osx or (ice.utils.shell(&quot;locate libzip.a&quot;) == ''):&lt;/nowiki&gt;&quot;<br /> #***Remove one indent from line 363<br /> #*If you encounter an error related to usleep, a discussion of this bug can be found [https://groups.google.com/forum/#!topic/g3d-users/BwslmuzAs44 here]<br /> #./buildg3d &lt;nowiki&gt;--&lt;/nowiki&gt;install lib<br /> <br /> == Configuring [[VRG3D]] ==<br /> [http://vis.cs.brown.edu/resources/doc/VRG3D/index.html VRG3D Documentation]<br /> #cd $G/import/vrg3d/vrg3d<br /> #python configure.py -vrpn $G/install_linux -g3d $G/install_linux -vrg3d $G/install_linux<br /> #*If working on a 64 bit system, edit configure.py and make the following replacements before running this command<br /> #**lib/libSDL to lib64/libSDL<br /> #**lib/libGLU to lib64/libGLU<br /> #***If you're on the Brown CS system, you may have to substitute /lib with /lib/x86_64-linux-gnu<br /> #make allclean<br /> #make all<br /> #make install<br /> <br /> == Installing [[MMotion]] ==<br /> <br /> #cd $G/common/MMotion<br /> #make<br /> #*If you get an error with this command edit the $G/common/build/make/compile.gcc.local.make<br /> #**Comment out $(GCC2_SUFFIX) on lines 50 - 53<br /> #**Comment out $(GCC3_SUFFIX) on lines 64 - 67<br /> #**Comment out $(GCC4_SUFFIX) on lines 90 - 93<br /> #**Comment out $(GCCX_SUFFIX) on lines 104 - 107<br /> #*If the environment variable GARCH is not set, set it, or you will be prompted to do so<br /> #make install<br /> <br /> == Installing Common [[Kuchora]] Packages ==<br /> <br /> #cd $G/common/kuchora<br /> #make<br /> #*You will get an error performing this step the first time, but it is required<br /> #*Before performing this step the second time<br /> #**Edit $G/common/kuchora/include/kuchora/KuchoraBaseApp.H and make the following replacements before running this command<br /> #**_camera to _cameras[0]<br /> #make install<br /> <br /> == Installing [[CavePainting]] ==<br /> <br /> #cd $G/project/kuchora/cavepainting<br /> #make<br /> #*If you get an error<br /> #**Change &quot;$(G_IMPORT)/g3d/g3d_8_$(G_COMPILER)&quot; in $G/common/build/make/g3d.make on line 20 to &quot;$(G)/install_linux&quot; <br /> #*If you get an error about missing -lvrg3d:<br /> #**Substitute lib64 with lib on line 18 of $G/common/build/make/vrg3d.make. The sed command 's/lib64/lib/g' should fix this.<br /> #make install<br /> <br /> == Allowing [[CavePainting]] to be Executed ==<br /> <br /> #cd $G/project/kuchora/cavepainting<br /> #chmod 775 run<br /> <br /> == Moving Files and Creating Symbolic Links to Work With Directory Structure ==<br /> <br /> #mkdir $G/project/kuchora/apps/<br /> #cd $G/project/kuchora/apps/<br /> #mv $G/project/kuchora/cavepainting/ $G/project/kuchora/apps/cavepainting<br /> #cd $G/project/kuchora/<br /> #ln -s $G/project/kuchora/apps/cavepainting/ cavepainting<br /> #cd $G/project/kuchora/<br /> #ln -s $G/common/kuchora/data/ kdata<br /> #mkdir $G/lib/<br /> #mkdir $G/lib/kuchora/<br /> #cd $G/lib/kuchora/<br /> #ln -s $G/project/kuchora/kdata/images/ images<br /> #cd $G/lib/kuchora/<br /> #ln -s $G/project/kuchora/kdata/fonts/ fonts<br /> <br /> == Running [[CavePainting]] in Desktop Mode ==<br /> <br /> [[Image:Screenshot from 2012-07-10 11_25_58.png|right|thumb|CavePainting Running in Desktop Mode]]<br /> #cd $G/project/kuchora/apps/cavepainting<br /> #./run desktop<br /> <br /> [[Category:CavePainting]][[Category:Software]][[Category:Art and Visualization]][[Category:CavePainting HOWTO]]</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Building_CavePainting&diff=6371 2013-07-24T21:25:01Z

<p>Wesley Miller: /* Installing CavePainting */</p> <hr /> <div>Currently, this has only been tested and shown to work on the CCV test curved wall at 94 Waterman.<br /> <br /> == Setting Up and Checking Everything Out ==<br /> <br /> #cd $G<br /> #*Before performing this step define $G as your sandbox directory and define CVSROOT as your username@ssh.cs.brown.edu:/research/graphics/cvsroot/<br /> #**An example can be found at [[Set_up_your_environment_for_diffusion_MRI_processing#Set_up_your_environment]]<br /> #**The file which you must edit may vary on different operating systems<br /> #cvs co common<br /> #cvs co project<br /> #cvs co import<br /> #mkdir install_linux<br /> #cd $G/import<br /> #svn co https://vrg3d.svn.sourceforge.net/svnroot/vrg3d vrg3d<br /> <br /> == Installing [[VRPN]] ==<br /> <br /> #cd $G/import/vrpn/kit<br /> #unzip vrpn_07_26.zip<br /> #cd $G/import/vrpn/kit/quat<br /> #make<br /> #*Before performing this step<br /> #**Edit the Makefile<br /> #***Uncomment the line corresponding to your machine's architecture<br /> #***Change INSTALL_DIR on line 31 from /usr/local to $G/install_linux<br /> #make install<br /> #cd $G/import/vrpn/kit/vrpn<br /> #make<br /> #*Before performing this step<br /> #**Edit the Makefile<br /> #***Uncomment the line corresponding to your machine's architecture<br /> #***Change INSTALL_DIR on line 52 from /usr/local to $G/install_linux<br /> #make install<br /> #cd $G/import/vrpn/kit/vrpn/server_src<br /> #make<br /> #*Before performing this step<br /> #**Edit the Makefile<br /> #***Uncomment the line corresponding to your machine's architecture<br /> #***Change INSTALL_DIR on line 29 from /usr/local to $G/install_linux<br /> #make install<br /> <br /> Note: The make files are sensitive to existing directories, so if you are installing to a shared directory, you may have to add a mkdir flag to avoid errors. The sed command 's/mkdir/mkdir -p/g' should do the trick.<br /> <br /> == Installing [[G3D]] ==<br /> <br /> #cd $G/import/g3d/kit<br /> #unzip G3D-8.01-src_cvs.zip<br /> #cd $G/import/g3d/kit/G3D<br /> #./buildg3d &lt;nowiki&gt;--&lt;/nowiki&gt;install update<br /> #*Before performing this step<br /> #**Edit buildg3d<br /> #***Change installDir on line 105 from '/usr/local' to '$G/install_linux'<br /> #****Actually type in the directory path of $G for this<br /> #***Comment out line 362 &quot;&lt;nowiki&gt;if osx or (ice.utils.shell(&quot;locate libzip.a&quot;) == ''):&lt;/nowiki&gt;&quot;<br /> #***Remove one indent from line 363<br /> #*If you encounter an error related to usleep, a discussion of this bug can be found [https://groups.google.com/forum/#!topic/g3d-users/BwslmuzAs44 here]<br /> #./buildg3d &lt;nowiki&gt;--&lt;/nowiki&gt;install lib<br /> <br /> == Configuring [[VRG3D]] ==<br /> [http://vis.cs.brown.edu/resources/doc/VRG3D/index.html VRG3D Documentation]<br /> #cd $G/import/vrg3d/vrg3d<br /> #python configure.py -vrpn $G/install_linux -g3d $G/install_linux -vrg3d $G/install_linux<br /> #*If working on a 64 bit system, edit configure.py and make the following replacements before running this command<br /> #**lib/libSDL to lib64/libSDL<br /> #**lib/libGLU to lib64/libGLU<br /> #make allclean<br /> #make all<br /> #make install<br /> <br /> == Installing [[MMotion]] ==<br /> <br /> #cd $G/common/MMotion<br /> #make<br /> #*If you get an error with this command edit the $G/common/build/make/compile.gcc.local.make<br /> #**Comment out $(GCC2_SUFFIX) on lines 50 - 53<br /> #**Comment out $(GCC3_SUFFIX) on lines 64 - 67<br /> #**Comment out $(GCC4_SUFFIX) on lines 90 - 93<br /> #**Comment out $(GCCX_SUFFIX) on lines 104 - 107<br /> #*If the environment variable GARCH is not set, set it, or you will be prompted to do so<br /> #make install<br /> <br /> == Installing Common [[Kuchora]] Packages ==<br /> <br /> #cd $G/common/kuchora<br /> #make<br /> #*You will get an error performing this step the first time, but it is required<br /> #*Before performing this step the second time<br /> #**Edit $G/common/kuchora/include/kuchora/KuchoraBaseApp.H and make the following replacements before running this command<br /> #**_camera to _cameras[0]<br /> #make install<br /> <br /> == Installing [[CavePainting]] ==<br /> <br /> #cd $G/project/kuchora/cavepainting<br /> #make<br /> #*If you get an error<br /> #**Change &quot;$(G_IMPORT)/g3d/g3d_8_$(G_COMPILER)&quot; in $G/common/build/make/g3d.make on line 20 to &quot;$(G)/install_linux&quot; <br /> #*If you get an error about missing -lvrg3d:<br /> #**Substitute lib64 with lib on line 18 of $G/common/build/make/vrg3d.make. The sed command 's/lib64/lib/g' should fix this.<br /> #make install<br /> <br /> == Allowing [[CavePainting]] to be Executed ==<br /> <br /> #cd $G/project/kuchora/cavepainting<br /> #chmod 775 run<br /> <br /> == Moving Files and Creating Symbolic Links to Work With Directory Structure ==<br /> <br /> #mkdir $G/project/kuchora/apps/<br /> #cd $G/project/kuchora/apps/<br /> #mv $G/project/kuchora/cavepainting/ $G/project/kuchora/apps/cavepainting<br /> #cd $G/project/kuchora/<br /> #ln -s $G/project/kuchora/apps/cavepainting/ cavepainting<br /> #cd $G/project/kuchora/<br /> #ln -s $G/common/kuchora/data/ kdata<br /> #mkdir $G/lib/<br /> #mkdir $G/lib/kuchora/<br /> #cd $G/lib/kuchora/<br /> #ln -s $G/project/kuchora/kdata/images/ images<br /> #cd $G/lib/kuchora/<br /> #ln -s $G/project/kuchora/kdata/fonts/ fonts<br /> <br /> == Running [[CavePainting]] in Desktop Mode ==<br /> <br /> [[Image:Screenshot from 2012-07-10 11_25_58.png|right|thumb|CavePainting Running in Desktop Mode]]<br /> #cd $G/project/kuchora/apps/cavepainting<br /> #./run desktop<br /> <br /> [[Category:CavePainting]][[Category:Software]][[Category:Art and Visualization]][[Category:CavePainting HOWTO]]</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Building_CavePainting&diff=6370 2013-07-24T20:51:21Z

<p>Wesley Miller: /* Installing Common Kuchora Packages */</p> <hr /> <div>Currently, this has only been tested and shown to work on the CCV test curved wall at 94 Waterman.<br /> <br /> == Setting Up and Checking Everything Out ==<br /> <br /> #cd $G<br /> #*Before performing this step define $G as your sandbox directory and define CVSROOT as your username@ssh.cs.brown.edu:/research/graphics/cvsroot/<br /> #**An example can be found at [[Set_up_your_environment_for_diffusion_MRI_processing#Set_up_your_environment]]<br /> #**The file which you must edit may vary on different operating systems<br /> #cvs co common<br /> #cvs co project<br /> #cvs co import<br /> #mkdir install_linux<br /> #cd $G/import<br /> #svn co https://vrg3d.svn.sourceforge.net/svnroot/vrg3d vrg3d<br /> <br /> == Installing [[VRPN]] ==<br /> <br /> #cd $G/import/vrpn/kit<br /> #unzip vrpn_07_26.zip<br /> #cd $G/import/vrpn/kit/quat<br /> #make<br /> #*Before performing this step<br /> #**Edit the Makefile<br /> #***Uncomment the line corresponding to your machine's architecture<br /> #***Change INSTALL_DIR on line 31 from /usr/local to $G/install_linux<br /> #make install<br /> #cd $G/import/vrpn/kit/vrpn<br /> #make<br /> #*Before performing this step<br /> #**Edit the Makefile<br /> #***Uncomment the line corresponding to your machine's architecture<br /> #***Change INSTALL_DIR on line 52 from /usr/local to $G/install_linux<br /> #make install<br /> #cd $G/import/vrpn/kit/vrpn/server_src<br /> #make<br /> #*Before performing this step<br /> #**Edit the Makefile<br /> #***Uncomment the line corresponding to your machine's architecture<br /> #***Change INSTALL_DIR on line 29 from /usr/local to $G/install_linux<br /> #make install<br /> <br /> Note: The make files are sensitive to existing directories, so if you are installing to a shared directory, you may have to add a mkdir flag to avoid errors. The sed command 's/mkdir/mkdir -p/g' should do the trick.<br /> <br /> == Installing [[G3D]] ==<br /> <br /> #cd $G/import/g3d/kit<br /> #unzip G3D-8.01-src_cvs.zip<br /> #cd $G/import/g3d/kit/G3D<br /> #./buildg3d &lt;nowiki&gt;--&lt;/nowiki&gt;install update<br /> #*Before performing this step<br /> #**Edit buildg3d<br /> #***Change installDir on line 105 from '/usr/local' to '$G/install_linux'<br /> #****Actually type in the directory path of $G for this<br /> #***Comment out line 362 &quot;&lt;nowiki&gt;if osx or (ice.utils.shell(&quot;locate libzip.a&quot;) == ''):&lt;/nowiki&gt;&quot;<br /> #***Remove one indent from line 363<br /> #*If you encounter an error related to usleep, a discussion of this bug can be found [https://groups.google.com/forum/#!topic/g3d-users/BwslmuzAs44 here]<br /> #./buildg3d &lt;nowiki&gt;--&lt;/nowiki&gt;install lib<br /> <br /> == Configuring [[VRG3D]] ==<br /> [http://vis.cs.brown.edu/resources/doc/VRG3D/index.html VRG3D Documentation]<br /> #cd $G/import/vrg3d/vrg3d<br /> #python configure.py -vrpn $G/install_linux -g3d $G/install_linux -vrg3d $G/install_linux<br /> #*If working on a 64 bit system, edit configure.py and make the following replacements before running this command<br /> #**lib/libSDL to lib64/libSDL<br /> #**lib/libGLU to lib64/libGLU<br /> #make allclean<br /> #make all<br /> #make install<br /> <br /> == Installing [[MMotion]] ==<br /> <br /> #cd $G/common/MMotion<br /> #make<br /> #*If you get an error with this command edit the $G/common/build/make/compile.gcc.local.make<br /> #**Comment out $(GCC2_SUFFIX) on lines 50 - 53<br /> #**Comment out $(GCC3_SUFFIX) on lines 64 - 67<br /> #**Comment out $(GCC4_SUFFIX) on lines 90 - 93<br /> #**Comment out $(GCCX_SUFFIX) on lines 104 - 107<br /> #*If the environment variable GARCH is not set, set it, or you will be prompted to do so<br /> #make install<br /> <br /> == Installing Common [[Kuchora]] Packages ==<br /> <br /> #cd $G/common/kuchora<br /> #make<br /> #*You will get an error performing this step the first time, but it is required<br /> #*Before performing this step the second time<br /> #**Edit $G/common/kuchora/include/kuchora/KuchoraBaseApp.H and make the following replacements before running this command<br /> #**_camera to _cameras[0]<br /> #make install<br /> <br /> == Installing [[CavePainting]] ==<br /> <br /> #cd $G/project/kuchora/cavepainting<br /> #make<br /> #*If you get an error<br /> #**Change &quot;$(G_IMPORT)/g3d/g3d_8_$(G_COMPILER)&quot; in $G/common/build/make/g3d.make on line 20 to &quot;$(G)/install_linux&quot; <br /> #*If you get an error about missing -lvrg3d:<br /> #**Substitute lib64 with lib on line 18. The sed command 's/lib64/lib/g' should fix this.<br /> #make install<br /> <br /> == Allowing [[CavePainting]] to be Executed ==<br /> <br /> #cd $G/project/kuchora/cavepainting<br /> #chmod 775 run<br /> <br /> == Moving Files and Creating Symbolic Links to Work With Directory Structure ==<br /> <br /> #mkdir $G/project/kuchora/apps/<br /> #cd $G/project/kuchora/apps/<br /> #mv $G/project/kuchora/cavepainting/ $G/project/kuchora/apps/cavepainting<br /> #cd $G/project/kuchora/<br /> #ln -s $G/project/kuchora/apps/cavepainting/ cavepainting<br /> #cd $G/project/kuchora/<br /> #ln -s $G/common/kuchora/data/ kdata<br /> #mkdir $G/lib/<br /> #mkdir $G/lib/kuchora/<br /> #cd $G/lib/kuchora/<br /> #ln -s $G/project/kuchora/kdata/images/ images<br /> #cd $G/lib/kuchora/<br /> #ln -s $G/project/kuchora/kdata/fonts/ fonts<br /> <br /> == Running [[CavePainting]] in Desktop Mode ==<br /> <br /> [[Image:Screenshot from 2012-07-10 11_25_58.png|right|thumb|CavePainting Running in Desktop Mode]]<br /> #cd $G/project/kuchora/apps/cavepainting<br /> #./run desktop<br /> <br /> [[Category:CavePainting]][[Category:Software]][[Category:Art and Visualization]][[Category:CavePainting HOWTO]]</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Building_ParaView&diff=6367 2013-07-23T23:50:25Z

<p>Wesley Miller: /* Running ParaView */</p> <hr /> <div>Currently, this has only been tested and shown to work on the CCV test curved wall at 94 Waterman.<br /> <br /> == Setting Up and Checking Everything Out ==<br /> <br /> # cd $G<br /> #* Before performing this step define $G as your sandbox directory<br /> #** An example can be found at [[Set_up_your_environment_for_diffusion_MRI_processing#Set_up_your_environment]]<br /> #** The file which you must edit may vary on different operating systems<br /> #* Visit [http://www.paraview.org/Wiki/ParaView:Build_And_Install the ParaView wiki] to make sure you have all of the prerequisite packages<br /> # git clone git://paraview.org/ParaView.git ParaView<br /> # cd $G/ParaView<br /> # git checkout -b trunk origin/master<br /> # git submodule init<br /> # git submodule update<br /> # mkdir $G/ParaView-bin<br /> <br /> == Building ParaView ==<br /> <br /> # cd $G/ParaView-bin<br /> # ccmake -D MPIEXEC=/usr/lib64/openmpi/bin/mpiexec -D QT_QMAKE_EXECUTABLE=/usr/lib64/qt48/bin/qmake $G/ParaView<br /> #* in the configuration, set MPI_C_INCLUDE_PATH to /usr/include/openmpi-x86_64<br /> #* configure and then generate<br /> # make<br /> # sudo make install<br /> <br /> == Running ParaView ==<br /> <br /> # cd $G/ParaView-bin/bin<br /> # ./paraview</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Building_ParaView&diff=6366 2013-07-23T23:50:15Z

<p>Wesley Miller: </p> <hr /> <div>Currently, this has only been tested and shown to work on the CCV test curved wall at 94 Waterman.<br /> <br /> == Setting Up and Checking Everything Out ==<br /> <br /> # cd $G<br /> #* Before performing this step define $G as your sandbox directory<br /> #** An example can be found at [[Set_up_your_environment_for_diffusion_MRI_processing#Set_up_your_environment]]<br /> #** The file which you must edit may vary on different operating systems<br /> #* Visit [http://www.paraview.org/Wiki/ParaView:Build_And_Install the ParaView wiki] to make sure you have all of the prerequisite packages<br /> # git clone git://paraview.org/ParaView.git ParaView<br /> # cd $G/ParaView<br /> # git checkout -b trunk origin/master<br /> # git submodule init<br /> # git submodule update<br /> # mkdir $G/ParaView-bin<br /> <br /> == Building ParaView ==<br /> <br /> # cd $G/ParaView-bin<br /> # ccmake -D MPIEXEC=/usr/lib64/openmpi/bin/mpiexec -D QT_QMAKE_EXECUTABLE=/usr/lib64/qt48/bin/qmake $G/ParaView<br /> #* in the configuration, set MPI_C_INCLUDE_PATH to /usr/include/openmpi-x86_64<br /> #* configure and then generate<br /> # make<br /> # sudo make install<br /> <br /> == Running ParaView ==<br /> <br /> # cd $G/ParaView-bin/bin<br /> $ ./paraview</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Building_ParaView&diff=6365 2013-07-23T23:48:21Z

<p>Wesley Miller: /* Building ParaView */</p> <hr /> <div>Currently, this has only been tested and shown to work on the CCV test curved wall at 94 Waterman.<br /> <br /> == Setting Up and Checking Everything Out ==<br /> <br /> # cd $G<br /> #* Before performing this step define $G as your sandbox directory<br /> #** An example can be found at [[Set_up_your_environment_for_diffusion_MRI_processing#Set_up_your_environment]]<br /> #** The file which you must edit may vary on different operating systems<br /> #* Visit [http://www.paraview.org/Wiki/ParaView:Build_And_Install the ParaView wiki] to make sure you have all of the prerequisite packages<br /> # git clone git://paraview.org/ParaView.git ParaView<br /> # cd $G/ParaView<br /> # git checkout -b trunk origin/master<br /> # git submodule init<br /> # git submodule update<br /> # mkdir $G/ParaView-bin<br /> <br /> == Building ParaView ==<br /> <br /> # cd $G/ParaView-bin<br /> # ccmake -D MPIEXEC=/usr/lib64/openmpi/bin/mpiexec -D QT_QMAKE_EXECUTABLE=/usr/lib64/qt48/bin/qmake $G/ParaView<br /> #* in the configuration, set MPI_C_INCLUDE_PATH to /usr/include/openmpi-x86_64<br /> #* configure and then generate<br /> # make<br /> # sudo make install</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Building_ParaView&diff=6364 2013-07-23T23:48:02Z

<p>Wesley Miller: /* Building ParaView */</p> <hr /> <div>Currently, this has only been tested and shown to work on the CCV test curved wall at 94 Waterman.<br /> <br /> == Setting Up and Checking Everything Out ==<br /> <br /> # cd $G<br /> #* Before performing this step define $G as your sandbox directory<br /> #** An example can be found at [[Set_up_your_environment_for_diffusion_MRI_processing#Set_up_your_environment]]<br /> #** The file which you must edit may vary on different operating systems<br /> #* Visit [http://www.paraview.org/Wiki/ParaView:Build_And_Install the ParaView wiki] to make sure you have all of the prerequisite packages<br /> # git clone git://paraview.org/ParaView.git ParaView<br /> # cd $G/ParaView<br /> # git checkout -b trunk origin/master<br /> # git submodule init<br /> # git submodule update<br /> # mkdir $G/ParaView-bin<br /> <br /> == Building ParaView ==<br /> <br /> # cd $G/ParaView-bin<br /> # ccmake -D MPIEXEC=/usr/lib64/openmpi/bin/mpiexec -D QT_QMAKE_EXECUTABLE=/usr/lib64/qt48/bin/qmake $G/ParaView<br /> #* in the configuration, set MPI_C_INCLUDE_PATH to /usr/include/openmpi-x86_64<br /> #* configure and then generate<br /> # make<br /> # make install<br /> #* If you get an error, try the following:<br /> #** sudo make install</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Building_ParaView&diff=6363 2013-07-23T23:47:45Z

<p>Wesley Miller: /* Building ParaView */</p> <hr /> <div>Currently, this has only been tested and shown to work on the CCV test curved wall at 94 Waterman.<br /> <br /> == Setting Up and Checking Everything Out ==<br /> <br /> # cd $G<br /> #* Before performing this step define $G as your sandbox directory<br /> #** An example can be found at [[Set_up_your_environment_for_diffusion_MRI_processing#Set_up_your_environment]]<br /> #** The file which you must edit may vary on different operating systems<br /> #* Visit [http://www.paraview.org/Wiki/ParaView:Build_And_Install the ParaView wiki] to make sure you have all of the prerequisite packages<br /> # git clone git://paraview.org/ParaView.git ParaView<br /> # cd $G/ParaView<br /> # git checkout -b trunk origin/master<br /> # git submodule init<br /> # git submodule update<br /> # mkdir $G/ParaView-bin<br /> <br /> == Building ParaView ==<br /> <br /> # cd $G/ParaView-bin<br /> # ccmake -D MPIEXEC=/usr/lib64/openmpi/bin/mpiexec -D QT_QMAKE_EXECUTABLE=/usr/lib64/qt48/bin/qmake $G/ParaView<br /> #* in the configuration, set MPI_C_INCLUDE_PATH to /usr/include/openmpi-x86_64<br /> #* configure and then generate<br /> # make<br /> # make install<br /> #* If you get an error, try sudo make install</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Building_ParaView&diff=6362 2013-07-23T22:12:49Z

<p>Wesley Miller: /* Building ParaView */</p> <hr /> <div>Currently, this has only been tested and shown to work on the CCV test curved wall at 94 Waterman.<br /> <br /> == Setting Up and Checking Everything Out ==<br /> <br /> # cd $G<br /> #* Before performing this step define $G as your sandbox directory<br /> #** An example can be found at [[Set_up_your_environment_for_diffusion_MRI_processing#Set_up_your_environment]]<br /> #** The file which you must edit may vary on different operating systems<br /> #* Visit [http://www.paraview.org/Wiki/ParaView:Build_And_Install the ParaView wiki] to make sure you have all of the prerequisite packages<br /> # git clone git://paraview.org/ParaView.git ParaView<br /> # cd $G/ParaView<br /> # git checkout -b trunk origin/master<br /> # git submodule init<br /> # git submodule update<br /> # mkdir $G/ParaView-bin<br /> <br /> == Building ParaView ==<br /> <br /> # cd $G/ParaView-bin<br /> # ccmake -D MPIEXEC=/usr/lib64/openmpi/bin/mpiexec -D QT_QMAKE_EXECUTABLE=/usr/lib64/qt48/bin/qmake $G/ParaView<br /> #* in the configuration, set MPI_C_INCLUDE_PATH to /usr/include/openmpi-x86_64<br /> #* configure and then generate<br /> # make<br /> # make install</div>

Wesley Miller http://vrl.cs.brown.edu/wiki/index.php?title=Building_ParaView&diff=6361 2013-07-23T22:08:21Z

<p>Wesley Miller: /* Building ParaView */</p> <hr /> <div>Currently, this has only been tested and shown to work on the CCV test curved wall at 94 Waterman.<br /> <br /> == Setting Up and Checking Everything Out ==<br /> <br /> # cd $G<br /> #* Before performing this step define $G as your sandbox directory<br /> #** An example can be found at [[Set_up_your_environment_for_diffusion_MRI_processing#Set_up_your_environment]]<br /> #** The file which you must edit may vary on different operating systems<br /> #* Visit [http://www.paraview.org/Wiki/ParaView:Build_And_Install the ParaView wiki] to make sure you have all of the prerequisite packages<br /> # git clone git://paraview.org/ParaView.git ParaView<br /> # cd $G/ParaView<br /> # git checkout -b trunk origin/master<br /> # git submodule init<br /> # git submodule update<br /> # mkdir $G/ParaView-bin<br /> <br /> == Building ParaView ==<br /> <br /> # cd $G/ParaView-bin<br /> # ccmake -D MPIEXEC=/usr/lib64/openmpi/bin/mpiexec -D QT_QMAKE_EXECUTABLE=/usr/lib64/qt48/bin/qmake $G/ParaView<br /> #* in the configuration, set MPI_C_INCLUDE_PATH to /usr/include/openmpi-x86_64</div>

Wesley Miller